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Record W4310465156 · doi:10.1093/jnci/djac215

Body mass index and molecular subtypes of colorectal cancer

2022· article· en· W4310465156 on OpenAlexafffund
Neil Murphy, Christina C. Newton, Nikos Papadimitriou, Michael Hoffmeister, Amanda I. Phipps, Tabitha A. Harrison, Polly A. Newcomb, Elom K. Aglago, Sonja I. Berndt, Hermann Brenner, Daniel D. Buchanan, Yin Cao, Andrew T. Chan, Xuechen Chen, Iona Cheng, Jenny Chang‐Claude, Niki Dimou, David A. Drew, Alton B. Farris, Amy J. French, Steven Gallinger, Peter Georgeson, Marios Giannakis, Graham G. Giles, Stephen B. Gruber, Sophia Harlid, Li Hsu, Wen‐Yi Huang, Mark A. Jenkins, Ruhina Shirin Laskar, Loı̈c Le Marchand, Paul J. Limburg, Yi Lin, Marko Mandic, Johnathan A. Nowak, Mireia Obón‐Santacana, Shuji Ogino, Conghui Qu, Lori C. Sakoda, Robert E. Schoen, Melissa C. Southey, Zsofia K. Stadler, Robert S. Steinfelder, Wei Sun, Stephen N. Thibodeau, Amanda E. Toland, Quang M. Trinh, Tomotaka Ugai, Bethany Van Guelpen, Xiaoliang Wang, Michael O. Woods, Syed Hassan Ejaz Zaidi, Marc J. Gunter, Ulrike Peters, Peter T. Campbell

Bibliographic record

VenueJNCI Journal of the National Cancer Institute · 2022
Typearticle
Languageen
FieldMedicine
TopicColorectal Cancer Screening and Detection
Canadian institutionsMemorial University of NewfoundlandLunenfeld-Tanenbaum Research InstituteOntario Institute for Cancer ResearchUniversity of TorontoMount Sinai Hospital
FundersNiilo Helanderin SäätiöOffice of Research Infrastructure Programs, National Institutes of HealthCanadian Institutes of Health ResearchCenters for Disease Control and PreventionNational Heart, Lung, and Blood InstituteVetenskapsrådetCancer Council VictoriaCancerfondenHarvard T.H. Chan School of Public HealthKnut och Alice Wallenbergs StiftelseFred Hutchinson Cancer Research CenterMcGill UniversityNational Cancer InstituteBrigham and Women's HospitalNational Health and Medical Research CouncilCancer Research UKAmerican Cancer SocietyBundesministerium für Bildung und ForschungCentre International de Recherche sur le CancerWorld Health OrganizationNational Institutes of HealthU.S. Department of Health and Human Services
KeywordsMicrosatellite instabilityBody mass indexInternal medicineColorectal cancerKRASOdds ratioOncologyMedicineCancerObesityBiologyGeneticsAlleleMicrosatellite

Abstract

fetched live from OpenAlex

BACKGROUND: Obesity is an established risk factor for colorectal cancer (CRC), but the evidence for the association is inconsistent across molecular subtypes of the disease. METHODS: We pooled data on body mass index (BMI), tumor microsatellite instability status, CpG island methylator phenotype status, BRAF and KRAS mutations, and Jass classification types for 11 872 CRC cases and 11 013 controls from 11 observational studies. We used multinomial logistic regression to estimate odds ratios (OR) and 95% confidence intervals (CI) adjusted for covariables. RESULTS: Higher BMI was associated with increased CRC risk (OR per 5 kg/m2 = 1.18, 95% CI = 1.15 to 1.22). The positive association was stronger for men than women but similar across tumor subtypes defined by individual molecular markers. In analyses by Jass type, higher BMI was associated with elevated CRC risk for types 1-4 cases but not for type 5 CRC cases (considered familial-like/Lynch syndrome microsatellite instability-H, CpG island methylator phenotype-low or negative, BRAF-wild type, KRAS-wild type, OR = 1.04, 95% CI = 0.90 to 1.20). This pattern of associations for BMI and Jass types was consistent by sex and design of contributing studies (cohort or case-control). CONCLUSIONS: In contrast to previous reports with fewer study participants, we found limited evidence of heterogeneity for the association between BMI and CRC risk according to molecular subtype, suggesting that obesity influences nearly all major pathways involved in colorectal carcinogenesis. The null association observed for the Jass type 5 suggests that BMI is not a risk factor for the development of CRC for individuals with Lynch syndrome.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.006
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.016

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.006
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0020.003
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.307
Teacher spread0.286 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations36
Published2022
Admission routes2
Has abstractyes

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