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Sex-related differences in allergen house dust mite-mediated changes in the lung proteome.

2022· article· en· W4312362190 on OpenAlexaff
Courtney Lynn Marshall, D Mostafa, M Hemshekhar, R Balshaw, V Spicer, Neeloffer Mookherjee

Bibliographic record

Venue03.02 - Airway cell biology and immunopathology · 2022
Typearticle
Languageen
FieldMedicine
TopicAsthma and respiratory diseases
Canadian institutionsGeorge & Fay Yee Centre for Healthcare InnovationUniversity of Manitoba
Fundersnot available
KeywordsAllergenProteomeHouse dust miteImmunologyLungAsthmaBiologyMiteInflammationMedicineAllergyInternal medicineBioinformatics

Abstract

fetched live from OpenAlex

<b>Introduction:</b> There are clear sex-related differences in the prevalence and severity in asthma, with women experiencing higher prevalence and severity in adults. However, sex dimorphism in allergen-mediated protein production in the lungs has not been completely defined. Therefore, in this study we comprehensively examined sex-related differences in allergen mediated protein profile using a murine model of airway inflammation. <b>Objective:</b> To characterize changes in the lung proteome in response to inhaled allergen house dust mite (HDM) in a mouse model of airway inflammation. <b>Methods:</b> Male and female BALB/c mice (7-8 weeks) were challenged with intranasal administration of 35uL of whole HDM extract (0.7mg/mL) in saline for 2 weeks. Lung tissues from naïve and HDM-challenged mice (n=5; per group per sex) collected 24h after last HDM challenge were used for quantitative proteomics with LC-MS/MS. Log2-transformed protein levels reported from mass spectrometry results were analyzed using linear models with terms for exposure, sex and their interaction. The interaction terms were then evaluated and summarized using volcano plots. <b>Results:</b> 2586 proteins were identified with high confidence by LC-MS/MS, of which 163 proteins were significantly different between males and females in response to HDM challenge. These 163 proteins provided insight into pathways that may contribute to underlying mechanisms of sex differences in asthma. <b>Conclusions:</b> HDM-mediated changes in the lung proteome reveal specific sex-related differences, which may be further targeted to unravel underlying mechanisms that contribute to sex disparity in asthma.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.109
Threshold uncertainty score0.676

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.236
Teacher spread0.226 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2022
Admission routes1
Has abstractyes

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