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Granzyme B: a biomarker of influenza infection in older adults

2017· article· en· W4313359901 on OpenAlexaff
Shahzma Merani, Shelly McNeil, Janet E. McElhaney

Bibliographic record

VenueThe Journal of Immunology · 2017
Typearticle
Languageen
FieldMedicine
TopicInfluenza Virus Research Studies
Canadian institutionsNova Scotia Health AuthorityDalhousie UniversityHealth Sciences North
Fundersnot available
KeywordsGranzyme BImmunologyMedicinePeripheral blood mononuclear cellGranzyme APerforinVirusImmune systemVirologyCD8Biology

Abstract

fetched live from OpenAlex

Abstract The importance of a T-cell mediated response against influenza infection in older adults has growing support. It has been previously shown that effector cells in older adults challenged with influenza virus produce granzyme B (GrB) in the absence of perforin. This lack of perforin could impair CTL directed killing and result in high extracellular GrB levels. GrB has been associated with various inflammatory and age related conditions and could also play an important role in influenza infection severity. We postulate that GrzB is a key mediator of inflammatory processes involved in severe influenza illness and could be used as a marker of influenza infection in older adults. Subjects over the age of 65 admitted to hospital with influenza like symptoms were recruited and grouped into cases of laboratory confirmed influenza illness (LCII) and influenza like illness (ILI). PBMCs were isolated from blood samples collected from participants on hospital admission and one month post-discharge. PBMCs were challenge with live influenza virus. Real-time PCR was used to quantify IFNγ, GrB and IL10 in PBMCs and isolated T-cells. We found that in vivo GrB levels in T-cells at the time of influenza infection in older adults were significantly higher in the LCII than the ILI group. Furthermore, ex vivo influenza virus challenge resulted in higher IFNγ, GrB and IL10 responses in subjects with LCII than ILI. Our study supports the association of elevated GrB and influenza infection status as well as the importance of T-cell mediated responses to infection. Future work will characterize GrB levels in older adults with varying severities of influenza illness with the aim to develop a point of care test to identify patients likely to develop serious outcomes.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0010.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.062
GPT teacher head0.386
Teacher spread0.324 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2017
Admission routes1
Has abstractyes

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