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Robust serum-free expansion of human B cells with an animal component-free cell culture supplement

2020· article· en· W4313369028 on OpenAlexaff
Frann Antignano, Sandra Babić, Allen Eaves, Mark Brown

Bibliographic record

VenueThe Journal of Immunology · 2020
Typearticle
Languageen
FieldMedicine
TopicCAR-T cell therapy research
Canadian institutionsBC Cancer AgencyStemcell Technologies
Fundersnot available
KeywordsAntibodyBiologyPopulationPeripheral blood mononuclear cellIn vitroCell cultureImmunologyCellAndrologyMolecular biologyBiochemistryMedicineGenetics

Abstract

fetched live from OpenAlex

Abstract Human B cells are utilized in workflows for discovering therapeutic antibodies and in the developing field of cellular therapy. The ability to expand the B cell population in blood samples from pathogen-exposed or naive patients offers the opportunity to improve the recovery of antibody sequences, increase the diversity of the B cell repertoire, or achieve de novo immunization in vitro. It can be difficult, however, to obtain robust expansion of B cells in cultures. Addition of serum improves performance, albeit with high lot-to-lot variability, and introduces the risk of contamination by adventitious agents. We have developed an animal component-free (ACF) supplement for culturing human B cells that does not require the use of serum, feeder cells, or specialized culture plates to achieve robust in vitro expansion. The ACF supplement is a 50X concentrate comprising non-animal-derived recombinant proteins and factors that can be added to a suitable base medium of choice to promote B cell activation and expansion. Human pan-B cells isolated from peripheral blood mononuclear cells (leukopaks) by immunomagnetic enrichment could be cultured and expanded in standard 24-well tissue culture plates for over 30 days, starting with seeding densities of 1 × 105 cells/well and passaging every few days from day 7 (± 1 day) onwards. Though pronounced inter-donor cell variability was observed in the rate of proliferation, an average ~55-fold, ~110-fold and ~160-fold expansion of viable B cells was obtained after 7, 11 and 14 days of culture, respectively (n = 21 donors; range 27- to 1090-fold at day 14 ± 1 day). Differentiation to plasma cells was apparent by flow cytometric analysis of CD138 and CD20.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0020.002

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.041
GPT teacher head0.288
Teacher spread0.247 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

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