MétaCan
Menu
Back to cohort

Comparative evaluation of metabolic, electrophilic, and immunologic effects of itaconate and its ester derivatives on macrophage activation

2020· article· en· W4313374505 on OpenAlexaff
Amanda C Swain, Monika Bambousková, Hyeryun Kim, Dustin Duncan, Karine Auclair, Victor Chubukov, Donald M. Simons, Thomas P. Roddy, Kelly M. Stewart, Maxim N. Artyomov

Bibliographic record

VenueThe Journal of Immunology · 2020
Typearticle
Languageen
FieldImmunology and Microbiology
TopicImmune cells in cancer
Canadian institutionsMcGill University
Fundersnot available
KeywordsElectrophileIntracellularSecretionMacrophageBiochemistryBiosynthesisItaconic acidChemistryBiologyEnzymeIn vitroOrganic chemistryCatalysisPolymer

Abstract

fetched live from OpenAlex

Abstract Following the discovery of itaconate’s immunoregulatory properties, several ester derivatives of this dicarboxylic acid were designed to further examine its role. Here, we compare the metabolic, electrophilic, and immunologic profiles of macrophages treated with unmodified itaconate and a panel of itaconate derivatives. Using WT and Irg1-deficient macrophages, we show that neither dimethyl itaconate (DI) nor 4-octyl itaconate (4OI) are converted into intracellular itaconate in either resting or TLR-activated cells, 4-monoethyl itaconate (4EI) yields only small quantities of intracellular itaconate, while exogenous itaconic acid readily enters macrophages and accumulates to physiologically relevant amounts. We find that both DI and 4OI induce a strong electrophilic stress response, in contrast to itaconate and 4EI. This correlated with their differential immunological impact: DI and 4OI both inhibited IκBζ induction and IL-6 secretion. In contrast, itaconate treatment had minimal impact on IκBζ, IL-6 and pro-IL-1β levels, but demonstrated a distinct defect in IL-1β secretion. Altogether, this systematic evaluation stresses the importance of using unmodified itaconate in future mechanistic studies.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.283
Teacher spread0.255 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2020
Admission routes1
Has abstractyes

Explore more

Same venueThe Journal of ImmunologySame topicImmune cells in cancerFrench-language works237,207