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The LFA-1 signal for cell migration influences Notch and TGF-β pathways with functional consequences for T-cells

2016· article· en· W4313380744 on OpenAlexaff
Navin Kumar Verma, Mobashar Hussain Urf Turabe Fazil, Ong Seow Theng, Madhavi Latha Somaraju Chalasani, P Praseetha, Sunil Kumar, Aditya K. Panda, Michael Freeley, Sinéad M. Smith, Bernhard O. Boehm, Dermot Kelleher

Bibliographic record

VenueThe Journal of Immunology · 2016
Typearticle
Languageen
FieldMedicine
TopicCell Adhesion Molecules Research
Canadian institutionsUniversity of British ColumbiaTrinity College
Fundersnot available
KeywordsCell biologyNotch signaling pathwayBiologyT cellSignal transductionCD28ImmunologyImmune system

Abstract

fetched live from OpenAlex

Abstract The integrin LFA-1 plays a key role in T-cell motility, which is critical for host defense and is also main driver of autoimmune diseases. However, whether and how LFA-1 signalling can modulate T-cell effector functions remain to be understood. We performed gene expression analysis of LFA-1-stimulated human T-cells and identified genomic signatures associated with Notch and TGF-β pathways, both involved in T-cell differentiation. The activation of Notch pathway in motile T-cells was confirmed by the nuclear translocation of cleaved Notch intracellular domain and up-regulation of target genes Hey1 and Hes1. LFA-1 stimulation of naïve peripheral blood mononuclear cells was found to promote T-cell Th1 polarization through a GSK3β signalling-dependent Notch pathway. We further detected that LFA-1 signalling up-regulated Stat3 and/or JNK activation-dependent expression of Smad7, Smurf2 and Ski causing T-cell TGF-β unresponsiveness. LFA-1-stimulated naïve T-cells were refractory to TGF-β-mediated induction of Foxp3+ iTreg or RORγt+ Th17 differentiation. Of note, peripheral or splenic T-cells isolated from patients with rheumatoid arthritis, type1 diabetes or thyroiditis showed constitutively high expression of Tbet. Pretreatment of cells with blocking anti-LFA-1 antibody, specific inhibitors or siRNA against identified molecules restored LFA-1-mediated modulation of T-cell functional phenotypes. Thus, LFA-1-mediated signalling is crucial for T-cell immunoregulation concurrent with T-cell motility, involving both Notch and TGF-β pathways. These findings have implications for normal immunologic functions and also have therapeutic relevance for inflammatory diseases.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.266
Teacher spread0.237 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2016
Admission routes1
Has abstractyes

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