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Neutrophil responses to acute <i>Mycobacterium tuberculosis</i> infection in non-human primates

2018· article· en· W4313383905 on OpenAlexaff
Jia Yao Phuah, Beth A. Fallert Junecko, Joshua T. Mattila

Bibliographic record

VenueThe Journal of Immunology · 2018
Typearticle
Languageen
FieldMedicine
TopicTuberculosis Research and Epidemiology
Canadian institutionsÉcole Nationale d'Administration Publique
Fundersnot available
KeywordsImmunologyMycobacterium tuberculosisTuberculosisBiologyTranscriptomeInfectious disease (medical specialty)CytokineDiseaseVirologyMedicineGene expressionGenePathology

Abstract

fetched live from OpenAlex

Abstract In human and animal models of Mycobacterium tuberculosis (Mtb) infection, neutrophil involvement is associated with severe active disease and increased tissue pathology in tuberculosis (TB). Transcriptomic analyses of human and non-human primate peripheral blood has identified distinct transcriptional signatures, especially during early stages of infection, that link neutrophils and active disease but the biology of peripheral blood neutrophils in TB remains poorly understood. This study is aimed at understanding neutrophil behavior during early stages of Mtb infection using the non-human primate model of TB infection. To accomplish this, we examined cytokine production, secretion, and gene transcription in cynomolgus macaque peripheral blood neutrophils early after Mtb infection. We found that peripheral blood neutrophils could secrete a surprising range of cytokines in response to mycobacterial stimulation, and in a longitudinal analyses, cytokine expression was upregulated between 3-5 weeks post Mtb infection. Studies on neutrophil transcriptional responses to Mtb were performed to identify changes induced by mycobacterial antigens. These results suggest that changes in host biology during early disease modify peripheral blood neutrophil responses to mycobacteria.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.345
Teacher spread0.327 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2018
Admission routes1
Has abstractyes

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