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Analysis of myelomonocytic populations during HIV infection (P6185)

2013· article· en· W4313386503 on OpenAlexaff
Lucie Barblu, Filippos Porichis, Meghan G. Hart, Daniel E. Kaufmann

Bibliographic record

VenueThe Journal of Immunology · 2013
Typearticle
Languageen
FieldImmunology and Microbiology
TopicImmune cells in cancer
Canadian institutionsHôpital Saint-Luc
Fundersnot available
KeywordsCD14CD86ImmunologyCCR2CD33CD16BiologyImmune systemT cellCD8ChemokineCell biology

Abstract

fetched live from OpenAlex

Abstract We hypothesized that alterations in the monocytic and myeloid-derived suppressor cells (MDSCs) subsets contributed to impaired T cell function in HIV infection. CD14++CD16- classical, CD14+CD16+ intermediate, CD14lowCD16+ non classical monocytes and HLA-DR-CD14+CD33+CD11b+ MDSCs surface markers (PDL-1, CD40, HLA-ABC, HLA-DR, CD86, CCR2) and intracellular molecules (IL-12, TNF-α) were analyzed by FACS. Studies were performed on freshly isolated PBMC of healthy controls (HD) and compared to HIV-infected subjects: ART Treated (ARTC), untreated progressors (CP) and elite controllers (EC). CP subjects had significantly higher MDSCs frequency than HD, ARTC and EC. CP also express higher level of all monocyte subsets than HD and ARTC. Classical monocytes of HIV+ individuals express less HLA Class I and II molecules than HD, with a trend observed for CD86. A marked decrease in IL-12 secretion in CP upon stimulation with recombinant IFN-γ and/or LPS was also present. Also, CCR2 looks like a good marker to evaluate the importance of non classical monocytes and MDSC populations as well. Our data show that compared to HD, myelomonocytic subsets in HIV+ individuals present phenotypic and functional differences that are not fully corrected by spontaneous or therapy-induced control of viral replication. Perturbations of these subsets can contribute to ongoing immune dysfunction in treated and untreated HIV-infected subjects and may represent a target for therapeutic interventions.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.005

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.015
GPT teacher head0.251
Teacher spread0.236 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2013
Admission routes1
Has abstractyes

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