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Direct comparison of Dll1- and Dll4-mediated Notch activation levels shows differential lympho-myeloid lineage commitment outcomes (36.27)

2010· article· en· W4313386746 on OpenAlexaff
Mahmood Mohtashami, Divya Shah, Hiroshi Nakase, Korosh Kianizad, Howard T. Petrie, Juan Carlos Zúñiga‐Pflücker

Bibliographic record

VenueThe Journal of Immunology · 2010
Typearticle
Languageen
FieldMedicine
TopicBiomedical Ethics and Regulation
Canadian institutionsSunnybrook HospitalUniversity of TorontoSunnybrook Health Science Centre
Fundersnot available
KeywordsLymphopoiesisLineage (genetic)MyeloidNotch signaling pathwayCell biologyHaematopoiesisBiologyTranscription factorFunction (biology)Cancer researchGeneGeneticsStem cellSignal transduction

Abstract

fetched live from OpenAlex

Abstract In the thymus, Notch signaling is known to be essential for T-lymphopoiesis, with the Notch ligand Delta like 4 (Dll4) being uniquely involved in this process. However, using stromal cell cultures, either Dll4 or Dll1 has been shown to support T-lymphopoiesis. To address which Dll is more effective at inducing hematopoietic progenitor cells to give rise to T-lineage cells in vitro, we generated OP9 cells expressing a series of incrementally discrete and equivalent levels of Dll1 or Dll4. In keeping with previous findings, OP9 cells expressing high levels of either Dll1 or Dll4 gave rise to T-lineage cells with similar efficacy, and prevented the differentiation of B- and myeloid-lineage cells. However, at limiting levels of Dll expression, Dll4 maintained its ability to inhibit B-lineage choice and induce T-lineage commitment and differentiation at lower levels of expression than Dll1. This manifest property of Dll4 is evident despite its lower levels of steady-state surface expression than Dll1 on OP9 cells. The heightened effectiveness of Dll4 over Dll1 also corresponded to the induction of expression of Notch target genes, and inhibition of B- and myeloid-specific transcription factors. Furthermore, OP9 cells expressing levels of Dll4 equivalent to those present in thymic epithelial cells gave rise to T-lineage cells, as expected, but were also permissive for the differentiation of myeloid cells, while still inhibiting the generation of B-lineage cells.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.741
Threshold uncertainty score0.326

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.033
GPT teacher head0.319
Teacher spread0.286 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2010
Admission routes1
Has abstractyes

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