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Record W4315474725 · doi:10.1016/j.mex.2023.102009

Generating post-hoc explanation from deep neural networks for multi-modal medical image analysis tasks

2023· article· en· W4315474725 on OpenAlexafffund
Weina Jin, Xiaoxiao Li, Mostafa Fatehi, Ghassan Hamarneh

Bibliographic record

VenueMethodsX · 2023
Typearticle
Languageen
FieldMedicine
TopicRadiomics and Machine Learning in Medical Imaging
Canadian institutionsUniversity of British ColumbiaSimon Fraser University
FundersAlliance de recherche numérique du CanadaBC Cancer FoundationSimon Fraser UniversityNvidia
KeywordsModalComputer scienceArtificial neural networkArtificial intelligenceFeature (linguistics)Kernel (algebra)Machine learningPattern recognition (psychology)Mathematics

Abstract

fetched live from OpenAlex

Explaining model decisions from medical image inputs is necessary for deploying deep neural network (DNN) based models as clinical decision assistants. The acquisition of multi-modal medical images is pervasive in practice for supporting the clinical decision-making process. Multi-modal images capture different aspects of the same underlying regions of interest. Explaining DNN decisions on multi-modal medical images is thus a clinically important problem. Our methods adopt commonly-used post-hoc artificial intelligence feature attribution methods to explain DNN decisions on multi-modal medical images, including two categories of gradient- and perturbation-based methods. • Gradient-based explanation methods - such as Guided BackProp, DeepLift - utilize the gradient signal to estimate the feature importance for model prediction. • Perturbation-based methods - such as occlusion, LIME, kernel SHAP - utilize the input-output sampling pairs to estimate the feature importance. • We describe the implementation details on how to make the methods work for multi-modal image input, and make the implementation code available.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.006
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.008
Threshold uncertainty score0.028

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.006
Meta-epidemiology (narrow)0.0010.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.000
Science and technology studies0.0000.001
Scholarly communication0.0010.001
Open science0.0020.001
Research integrity0.0010.002
Insufficient payload (model declined to judge)0.0080.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.038
GPT teacher head0.400
Teacher spread0.362 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations32
Published2023
Admission routes2
Has abstractyes

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