MétaCan
Menu
Back to cohort
Record W4317698015 · doi:10.1002/cpt.2854

<scp><i>ABCB1</i></scp> Gene Variants and Antidepressant Treatment Outcomes: A Systematic Review and Meta‐Analysis Including Results from the <scp>CAN‐BIND</scp>‐1 Study

2023· review· en· W4317698015 on OpenAlexafffundabout
Leen Magarbeh, Claudia Hassel, Maximilian Choi, Farhana Islam, Victoria Marshe, Clement C. Zai, Rayyan Zuberi, Roseann S. Gammal, Xiaoyu Men, Maike Scherf‐Clavel, Dietmar Enko, Benício N. Frey, Roumen Milev, Cláudio N. Soares, Sagar V. Parikh, Franca Placenza, Stephen C. Strother, Stefanie Hassel, Valerie H. Taylor, Francesco Leri, Pierre Blier, Faranak Farzan, Raymond W. Lam, Gustavo Turecki, Jane A. Foster, Susan Rotzinger, Stefan Kloiber, James L. Kennedy, Sidney H. Kennedy, Chad Bousman, Daniel J. Müller

Bibliographic record

VenueClinical Pharmacology & Therapeutics · 2023
Typereview
Languageen
FieldMedicine
TopicDrug Transport and Resistance Mechanisms
Canadian institutionsSt. Michael's HospitalDouglas Mental Health University InstituteMcGill UniversitySimon Fraser UniversitySt. Joseph’s Healthcare HamiltonRoyal Ottawa Mental Health CentreMcMaster UniversityQueen's UniversityUniversity of British ColumbiaCentre for Addiction and Mental HealthUniversity of GuelphUniversity of CalgaryUniversity Health NetworkUniversity of Toronto
FundersJanssen CanadaH. Lundbeck A/SPfizer CanadaMichael Smith Health Research BCMitacsEisaiAllerganCanadian Network for Mood and Anxiety TreatmentsCanadian Institutes of Health ResearchSunovionServierNatural Sciences and Engineering Research Council of CanadaFondation Brain CanadaPfizerGovernment of OntarioBristol-Myers Squibb
KeywordsAntidepressantSingle-nucleotide polymorphismMeta-analysisMajor depressive disorderOdds ratioMedicineInternal medicineTolerabilityOncologyConfidence intervalGenotypingPharmacogeneticsPharmacologyBioinformaticsPsychiatryGenotypeGeneticsBiologyGeneAdverse effect

Abstract

fetched live from OpenAlex

The P-glycoprotein efflux pump, encoded by the ABCB1 gene, has been shown to alter concentrations of various antidepressants in the brain. In this study, we conducted a systematic review and meta-analysis to investigate the association between six ABCB1 single-nucleotide polymorphisms (SNPs; rs1045642, rs2032582, rs1128503, rs2032583, rs2235015, and rs2235040) and antidepressant treatment outcomes in individuals with major depressive disorder (MDD), including new data from the Canadian Biomarker and Integration Network for Depression (CAN-BIND-1) cohort. For the CAN-BIND-1 sample, we applied regression models to investigate the association between ABCB1 SNPs and antidepressant treatment response, remission, tolerability, and antidepressant serum levels. For the meta-analysis, we systematically summarized pharmacogenetic evidence of the association between ABCB1 SNPs and antidepressant treatment outcomes. Studies were included in the meta-analysis if they investigated at least one ABCB1 SNP in individuals with MDD treated with at least one antidepressant. We did not find a significant association between ABCB1 SNPs and antidepressant treatment outcomes in the CAN-BIND-1 sample. A total of 39 studies were included in the systematic review. In the meta-analysis, we observed a significant association between rs1128503 and treatment response (T vs. C-allele, odds ratio = 1.30, 95% confidence interval = 1.15-1.48, P value (adjusted) = 0.024, n = 2,526). We did not find associations among the six SNPs and treatment remission nor tolerability. Our findings provide limited evidence for an association between common ABCB1 SNPs and antidepressant outcomes, which do not support the implementation of ABCB1 genotyping to inform antidepressant treatment at this time. Future research, especially on rs1128503, is recommended.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.007
metaresearch head score (Gemma)0.020
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Meta-analysis · Consensus signal: Meta-analysis
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.012
Threshold uncertainty score0.039

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0070.020
Meta-epidemiology (narrow)0.0020.001
Meta-epidemiology (broad)0.0120.026
Bibliometrics0.0040.009
Science and technology studies0.0010.001
Scholarly communication0.0020.001
Open science0.0010.001
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0040.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.328
GPT teacher head0.480
Teacher spread0.152 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designMeta-analysis
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations18
Published2023
Admission routes3
Has abstractyes

Explore more

Same venueClinical Pharmacology & TherapeuticsSame topicDrug Transport and Resistance MechanismsFrench-language works237,207