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Record W4318033676 · doi:10.4143/crt.2022.1407

Clinical Significance of bZIP In-Frame CEBPA-Mutated Normal Karyotype Acute Myeloid Leukemia

2023· article· en· W4318033676 on OpenAlexaff
Seo‐Yeon Ahn, Tae‐Hyung Kim, Mihee Kim, Ga‐Young Song, Sunghoon Jung, Deok‐Hwan Yang, Je‐Jung Lee, Mi Yeon Kim, Chul Won Jung, Jun‐Ho Jang, Hee‐Je Kim, Joon Ho Moon, Sang Kyun Sohn, Jong-Ho Won, Sung‐Hyun Kim, Hyeoung‐Joon Kim, Jae‐Sook Ahn, Dennis Dong Hwan Kim

Bibliographic record

VenueCancer Research and Treatment · 2023
Typearticle
Languageen
FieldMedicine
TopicAcute Myeloid Leukemia Research
Canadian institutionsPrincess Margaret Cancer CentreUniversity of Toronto
FundersMinistry of Science and ICT, South KoreaNational Research Foundation of KoreaChonnam National UniversityMinistry of Health and WelfareNational Research FoundationChonnam National University Hwasun HospitalMike and Josie Harper Cancer Research Institute
KeywordsCEBPAMedicineKaryotypeMyeloid leukemiaCancer researchInternal medicineGeneticsMutationChromosomeBiologyGene

Abstract

fetched live from OpenAlex

Purpose We evaluated the characteristics of CCAAT/enhancer-binding protein α (<i>CEBPA</i>) mutations and the significance of a basic leucine zipper in-frame mutation (bZIP<sup>in-f</sup>) of <i>CEBPA</i> in patients with acute myeloid leukemia with a normal karyotype.Materials and Methods Based on updated knowledge of <i>CEBPA</i> mutations, we conducted next-generation sequencing analyses in a previously established real-world cohort.Results Among 78 of a total of 395 patients (19.7%), 50 had bZIP<sup>in-f</sup> <i>CEBPA</i>, and 28 had non-bZIP<sup>in-f</sup> <i>CEBPA</i>. In the multivariate analysis, patients with <i>NPM1</i><sup>mut</sup>, those with bZIP<sup>in-f</sup> <i>CEBPA</i>, and those who underwent allogeneic hematopoietic cell transplantation (allo-HCT) had favorable overall survival (OS), but <i>FLT3</i>-ITD<sup>mut</sup> was a poor prognostic indicator. For relapse-free survival (RFS) and cumulative incidence of relapse, bZIP<sup>in-f</sup> <i>CEBPA</i>, and allo-HCT were associated with favorable outcomes; <i>FLT3</i>-ITD<sup>pos</sup> was associated with worse outcomes. In the <i>CEBPA</i> double-mutated group (<i>CEBPA</i><sup>dm</sup>), bZIP<sup>in-f</sup> <i>CEBPA</i> was associated with superior outcomes in terms of OS (p=0.007) and RFS (p=0.007) compared with non-bZIP<sup>in-f</sup> <i>CEBPA</i>. Of 50 patients with bZIP<sup>in-f</sup> <i>CEBPA</i>, 36 patients had at least one mutation. When grouped by the presence of mutations in chromatic/DNA modifiers (C), cohesion complex (C), and splicing genes (S) (CCS mutations), CCS-mutated bZIP<sup>in-f</sup> <i>CEBPA</i> was associated with poor OS (p=0.044; hazard ratio [HR], 2.419) and a trend in inferior RFS (p=0.186; HR, 1.838).Conclusion Only bZIP<sup>in-f</sup> <i>CEBPA</i> was associated with favorable outcomes in patients with <i>CEBPA</i><sup>dm</sup>. However, some mutations accompanying bZIP<sup>in-f</sup> <i>CEBPA</i> showed inferior OS; thus, further studies with larger numbers of patients are required for clear conclusions of the significance of bZIP<sup>in-f</sup> <i>CEBPA<i>.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.275
Threshold uncertainty score0.701

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0010.002
Science and technology studies0.0000.001
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.112
GPT teacher head0.450
Teacher spread0.338 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2023
Admission routes1
Has abstractyes

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