An outbreak of toxoplasmosis in an aviary collection of Nicobar pigeons (Caloenas nicobaria) : clinical communication
Bibliographic record
Abstract
Three out of 10 Nicobar pigeons (Caloenas nicobaria ) in an aviary collection in South Africa were found dead with no presenting clinical symptoms. Histological examination of formalin-fixed tissues from all these birds revealed necrotic foci in various visceral organs (liver, spleen, heart, kidney and lungs), plus diffuse pulmonary congestion and oedema with vasculitis. Numerous protozoal tachyzoites were present in all organs and there was strong positive immunohistochemical (IHC) labelling of these organisms for Toxoplasma gondii. Pathology was consistent with acute systemic toxoplasmosis as a consequence of oocyst ingestion. Feral cats were known to be a problem at the facility. Clinical toxoplasmosis is rarely reported in pigeons and this is believed to be the 1st report of toxoplasmosis in Nicobar pigeons.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.000 | 0.001 |
| Meta-epidemiology (narrow) | 0.001 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.001 | 0.001 |
| Science and technology studies | 0.002 | 0.001 |
| Scholarly communication | 0.001 | 0.000 |
| Open science | 0.001 | 0.001 |
| Research integrity | 0.002 | 0.001 |
| Insufficient payload (model declined to judge) | 0.002 | 0.000 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".