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Record W4318819353 · doi:10.1101/2023.01.30.23285219

Coinfection with <i>Strongyloides</i> and SARS-CoV-2: protocol for a systematic review

2023· review· en· W4318819353 on OpenAlexafffund
Elena Cecilia Roşca, Carl Heneghan, Elizabeth Spencer, Annette Plüddemann, Susanna Maltoni, Sara Gandini, Igho Onakpoya, David H. Evans, John Conly, Tom Jefferson

Bibliographic record

VenuemedRxiv · 2023
Typereview
Languageen
FieldImmunology and Microbiology
TopicParasites and Host Interactions
Canadian institutionsAlberta Health ServicesUniversity of CalgaryUniversity of Alberta
FundersNIHR School for Primary Care ResearchDepartment of Health and Social CareNational Institute for Health and Care ResearchUniversity of Calgary
KeywordsCoinfectionStrongyloidiasisStrongyloidesContext (archaeology)MedicineIntensive care medicineCoronavirus disease 2019 (COVID-19)Causality (physics)DiseaseImmunologyHuman immunodeficiency virus (HIV)PathologyInfectious disease (medical specialty)Biology

Abstract

fetched live from OpenAlex

Abstract Rationale for the review COVID-19 treatment can worsen parasitic disease in patients with coinfection. Consequently, there is a need to investigate the infection with SARS-CoV-2 and Strongyloides . We aim to systematically review clinical and laboratory features of COVID-19 and Strongyloides coinfection, to investigate possible interventions and outcomes in this pathology. Also, we aim to identify difficulties in managing the parasitic disease manifestations in this context and to emphasize research gaps requiring further attention. Methods We will search two electronic databases – LitCOVID, and WHO COVID-19 and will include studies on SARS-CoV-2 and Strongyloides coinfection. We will adapt the WHO-UMC system for standardized case causality assessment to evaluate if using corticosteroids or other immunosuppressive drugs in COVID-19 patients determined acute strongyloidiasis manifestations. Expected results We will present the evidence in three distinct packages: study description, methodological quality assessment and data extracted. We will summarize the evidence and will draw conclusions as to the quality of the evidence.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Systematic review · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.565
Threshold uncertainty score0.966

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0020.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.089
GPT teacher head0.425
Teacher spread0.336 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSystematic review
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes2
Has abstractyes

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