MétaCan
Menu
Back to cohort
Record W4318819353 · doi:10.1101/2023.01.30.23285219

Coinfection with <i>Strongyloides</i> and SARS-CoV-2: protocol for a systematic review

2023· review· en· W4318819353 on OpenAlexafffund
Elena Cecilia Roşca, Carl Heneghan, Elizabeth Spencer, Annette Plüddemann, Susanna Maltoni, Sara Gandini, Igho Onakpoya, David H. Evans, John Conly, Tom Jefferson

Bibliographic record

VenuemedRxiv · 2023
Typereview
Languageen
FieldImmunology and Microbiology
TopicParasites and Host Interactions
Canadian institutionsAlberta Health ServicesUniversity of CalgaryUniversity of Alberta
FundersNIHR School for Primary Care ResearchDepartment of Health and Social CareNational Institute for Health and Care ResearchUniversity of Calgary
KeywordsCoinfectionStrongyloidiasisStrongyloidesContext (archaeology)MedicineIntensive care medicineCoronavirus disease 2019 (COVID-19)Causality (physics)DiseaseImmunologyHuman immunodeficiency virus (HIV)PathologyInfectious disease (medical specialty)Biology

Abstract

fetched live from OpenAlex

Abstract Rationale for the review COVID-19 treatment can worsen parasitic disease in patients with coinfection. Consequently, there is a need to investigate the infection with SARS-CoV-2 and Strongyloides . We aim to systematically review clinical and laboratory features of COVID-19 and Strongyloides coinfection, to investigate possible interventions and outcomes in this pathology. Also, we aim to identify difficulties in managing the parasitic disease manifestations in this context and to emphasize research gaps requiring further attention. Methods We will search two electronic databases – LitCOVID, and WHO COVID-19 and will include studies on SARS-CoV-2 and Strongyloides coinfection. We will adapt the WHO-UMC system for standardized case causality assessment to evaluate if using corticosteroids or other immunosuppressive drugs in COVID-19 patients determined acute strongyloidiasis manifestations. Expected results We will present the evidence in three distinct packages: study description, methodological quality assessment and data extracted. We will summarize the evidence and will draw conclusions as to the quality of the evidence.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.044
metaresearch head score (Gemma)0.075
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Systematic review · Consensus signal: Systematic review
GenreCandidate signal: Protocol · Consensus signal: Protocol
Teacher disagreement score0.064
Threshold uncertainty score0.235

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0440.075
Meta-epidemiology (narrow)0.0050.005
Meta-epidemiology (broad)0.0200.019
Bibliometrics0.0140.010
Science and technology studies0.0030.004
Scholarly communication0.0080.007
Open science0.0040.005
Research integrity0.0060.005
Insufficient payload (model declined to judge)0.0640.008

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.089
GPT teacher head0.425
Teacher spread0.336 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSystematic review
Domainnot available
GenreProtocol

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes2
Has abstractyes

Explore more

Same venuemedRxivSame topicParasites and Host InteractionsFrench-language works237,207