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Record W4319078822 · doi:10.1101/2023.02.03.526931

Why is there so much variability in crop multi-model studies?

2023· preprint· en· W4319078822 on OpenAlexafffund
Daniel Wallach, Taru Palosuo, Henrike Mielenz, Samuel Buis, Peter J. Thorburn, Senthold Asseng, Benjamin Dumont, Roberto Ferrise, Sebastian Gayler, Afshin Ghahramani, Matthew Tom Harrison, Zvi Hochman, Gerrit Hoogenboom, Mingxia Huang, Qi Jing, Eric Justes, Kurt Christian Kersebaum, Marie Launay, Elisabet Lewan, Ke Liu, Qunying Luo, Fasil Mequanint, Claas Nendel, Gloria Padovan, Jørgen E. Olesen, Johannes Wilhelmus Maria Pullens, Budong Qian, Diana-Maria Seserman, Vakhtang Shelia, Amir Souissi, Xenia Specka, Jing Wang, Tobias Karl David Weber, Lutz Weihermüller, Sabine J. Seidel

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2023
Typepreprint
Languageen
FieldAgricultural and Biological Sciences
TopicClimate change impacts on agriculture
Canadian institutionsAgriculture and Agri-Food Canada
FundersBonaResNational Science Fund for Distinguished Young ScholarsNational Institute of Food and AgriculturePriority Academic Program Development of Jiangsu Higher Education InstitutionsChina Scholarship CouncilBundesministerium für Bildung und ForschungNational Key Research and Development Program of ChinaHigher Education Discipline Innovation ProjectInstitut National de la Recherche AgronomiqueAcademy of FinlandUniversity of Southern QueenslandGrains Research and Development CorporationJoint Programming Initiative A healthy diet for a healthy lifeDeutsche ForschungsgemeinschaftMinisterstvo Školství, Mládeže a TělovýchovyU.S. Department of AgricultureAgriculture and Agri-Food CanadaNational Science Foundation
KeywordsUncertainty analysisVariance (accounting)Sensitivity analysisSet (abstract data type)Estimation theoryCalibrationStatisticsModel parameterMathematicsEconometricsComputer science

Abstract

fetched live from OpenAlex

Abstract It has become common to compare crop model results in multi-model simulation experiments. In general, one observes a large variability in such studies, which reduces the confidence one can have in such models. It is important to understand the causes of this variability as a first step toward reducing it. For a given data set, the variability in a multi-model study can arise from uncertainty in structure or in parameter values for a given structure. Previous studies have made assumptions about the origin of parameter uncertainty, and then quantified its contribution, generally finding that parameter uncertainty is less important than structure uncertainty. However, those studies do not take account of the full parameter variability in multi-model studies. Here we propose estimating parameter uncertainty based on open-call multi-model ensembles where the same structure is used by more than one modeling group. The variability in such a case is due to the full variability of parameters among modeling groups. Then structure and parameter contributions can be estimated sing random effects analysis of variance. Based on three multi-model studies for simulating wheat phenology, it is found that the contribution of parameter uncertainty to total uncertainty is, on average, more than twice as large as the uncertainty from structure. A second estimate, based on a comparison of two different calibration approaches for multiple models leads to a very similar result. We conclude that improvement of crop models requires as much attention to parameters as to model structure.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.039
metaresearch head score (Gemma)0.075
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesnone
DomainCandidate signal: Methods · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.961
Threshold uncertainty score0.209

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0390.075
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0010.002
Science and technology studies0.0010.001
Scholarly communication0.0030.003
Open science0.0020.002
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.091
GPT teacher head0.285
Teacher spread0.194 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designSimulation or modeling
DomainMethods
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2023
Admission routes2
Has abstractyes

Explore more

Same venuebioRxiv (Cold Spring Harbor Laboratory)→Same topicClimate change impacts on agriculture→French-language works237,207→