A revised taxonomy and estimate of species diversity for western North American Lampetra
Bibliographic record
Abstract
Abstract Lampreys are an ancient lineage of jawless fish for which the relationships among some lineages are uncertain. We addressed these information gaps for Lampetra species with a focus on western North America. Phylogenetic analysis using all publicly available sequences of two mitochondrial genes—cyt b and COI—supported designation of western North American Lampetra as a distinct genus from Lampetra in Europe, Asia, and eastern North America. Species delimitation analysis of cyt b sequences identified seven species, only three of which are currently recognized. Lampetra ayresii and L. richardsoni, regarded as separate under the “paired species concept,” were not genetically distinct; we recommend synonymizing L. richardsoni with L. ayresii because the latter has precedence, yet continuing to recognize each ecotype using its current common name. Other than the widespread L. ayresii clade, all other species exhibited limited ranges often restricted to one or two locations. Within headwaters of the Willamette River, L. ayresii demonstrated strong genetic structure and lack of gene flow among subbasins, indicating that the subbasin scale may represent an appropriate management unit. However, the appropriate management scale in other areas may differ based on evolutionary histories and gene flow. Subsequent work is needed across western North America to better delineate the ranges of the aforementioned species and to evaluate whether other unrecognized taxa in this lineage may be present.
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How this classification was reachedexpand
Full frame machine prediction
Teacher imitationNot calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.
Distilled classifier scores by category (both heads)
| Category | Codex | Gemma |
|---|---|---|
| Metaresearch | 0.002 | 0.002 |
| Meta-epidemiology (narrow) | 0.001 | 0.000 |
| Meta-epidemiology (broad) | 0.000 | 0.000 |
| Bibliometrics | 0.008 | 0.003 |
| Science and technology studies | 0.001 | 0.001 |
| Scholarly communication | 0.001 | 0.002 |
| Open science | 0.001 | 0.001 |
| Research integrity | 0.000 | 0.001 |
| Insufficient payload (model declined to judge) | 0.002 | 0.001 |
Machine scores (provisional)
The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.
Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.
score_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from itClassification
machine, unvalidatedMachine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.
How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".