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Record W4322762324 · doi:10.21203/rs.3.rs-2638368/v1

Immune potency of bioreactor-aged dendritic cells in 3D collagen matrices

2023· preprint· en· W4322762324 on OpenAlexfundno aff
Mei ElGindi, Jiranuwat Sapudom, Anna Garcia‐Sabaté, Brian Chesney Quartey, Aseel Alatoom, Mohamed Al‐Sayegh, Weiqiang Chen, Jeremy Teo

Bibliographic record

VenueResearch Square · 2023
Typepreprint
Languageen
FieldImmunology and Microbiology
TopicImmunotherapy and Immune Responses
Canadian institutionsnot available
FundersYork UniversityNew York University Abu Dhabi
KeywordsPotencyImmune systemBioreactorChemistryImmunologyMedicineIn vitroBiochemistry

Abstract

fetched live from OpenAlex

Abstract The processes of aging and space travel both have significant adverse effects on the immune system, resulting in increased susceptibility to infections. Using simulated microgravity platforms, such as the random positioning machine (RPM), on Earth allows us to investigate these effects to better facilitate future space travel and our understanding of the aging immune system. Dendritic cells (DCs) are key players in linking the innate and adaptive immune responses. Their distinct differentiation and maturation phases play vital roles in presenting antigens and mounting effective T-cell responses. However, DCs primarily reside in tissues such as the skin and lymph nodes. To date, no studies have effectively investigated the effects of aging via RPM on DCs in their native microenvironment. With 3D biomimetic collagen hydrogels, we can study the effects on DCs in more physiologically relevant microenvironments. In this study, we investigated the effects of loose and dense culture matrices on the phenotype, function, and transcriptome profile of immature and mature DCs utilizing an RPM to simulate an accelerated aging model. Our data indicate that an aged, or loose tissue microenvironment, and exposure to RPM conditions decrease the immunogenicity of iDCs and mDCs. Interestingly, cells cultured in dense matrices experienced fewer effects by the RPM at the transcriptome level.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.002

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.051
GPT teacher head0.352
Teacher spread0.301 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes1
Has abstractyes

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