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Record W4323366110 · doi:10.21105/joss.05091

Biosiglive: an Open-Source Python Package for Real-timeBiosignal Processing

2023· article· en· W4323366110 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.
fundA Canadian funder is recorded on the work.

Bibliographic record

VenueThe Journal of Open Source Software · 2023
Typearticle
Languageen
FieldComputer Science
TopicModeling and Simulation Systems
Canadian institutionsUniversité de Montréal
FundersNatural Sciences and Engineering Research Council of Canada
KeywordsBiosignalOpen sourcePython (programming language)Computer scienceOperating systemSoftware

Abstract

fetched live from OpenAlex

biosiglive aims to provide a simple and efficient way to access and process biomechanical data in real time.It was conceived as user-friendly software aimed for both non-expert and expert programmers.The library uses interfaces to access data from several sources, such as motion capture software or any Python software development kit (SDK).Some interfaces are already implemented for Vicon Nexus motion capture (Oxford, UK) and Delsys electromyography SDK (EMG) (Boston, USA).That say, any additional interface can be added as custom interface using the abstract class.biosiglive was designed for biosignals, therefore, existing classes represent data collected from standard acquisition systems in biomechanics, such as markers for motion capture or EMG.Methods are available to process in real-time any input signal.Data can be saved in a binary file at each time frame to avoid any data loss in case of system shutdown.Data can also be displayed using the LivePlot class, which is based on PyQtGraph (C++ core) and allows, therefore, fast real-time displaying.Finally, 'biosiglive' was conceived as a flexible real-time data processing and streaming tool adaptable to various set-ups, software, and systems.Therefore, a TCP/IP connection module was implemented to send data to a distant port to be used by any other system.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.006
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesScholarly communication, Open science
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.856
Threshold uncertainty score0.999

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0060.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0010.000
Scholarly communication0.0020.002
Open science0.0060.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.076
GPT teacher head0.354
Teacher spread0.278 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it