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Record W4323569136 · doi:10.1101/2023.03.04.531108

MerTK mediates the immunologically silent uptake of alpha-synuclein fibrils by human microglia

2023· preprint· en· W4323569136 on OpenAlexafffund
Marie‐France Dorion, Konstantin Senkevich, Moein Yaqubi, Nicholas W. Kieran, Carol X.‐Q. Chen, Adam MacDonald, Wen Luo, Amber Wallis, Irina Shlaifer, Jeffery A. Hall, Roy Dudley, Ian A. Glass, Jo Anne Stratton, Edward A. Fon, Tim Bartels, Jack P. Antel, Ziv Gan‐Or, Thomas M. Durcan, Luke M. Healy

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2023
Typepreprint
Languageen
FieldNeuroscience
TopicNeuroinflammation and Neurodegeneration Mechanisms
Canadian institutionsMontreal Children's HospitalMcGill UniversityMontreal Neurological Institute and Hospital
FundersNational Institute of Child Health and Human DevelopmentFonds de Recherche du Québec - SantéCanada First Research Excellence FundNational Institutes of HealthNational Institute of Neurological Disorders and StrokeVerily Life SciencesQuébec Consortium for Drug DiscoveryCanadian Institutes of Health ResearchCompute CanadaMcGill UniversityPfizerCelgeneEunice Kennedy Shriver National Institute of Child Health and Human DevelopmentSanofiMichael J. Fox Foundation for Parkinson's ResearchFoundation for the National Institutes of Health
KeywordsMERTKMicrogliaDementia with Lewy bodiesSynucleinopathiesInternalizationCell biologyBiologyAlpha-synucleinParkinson's diseaseReceptorImmunologyPathologyReceptor tyrosine kinaseSignal transductionMedicineDementiaDiseaseBiochemistryInflammation

Abstract

fetched live from OpenAlex

Abstract MerTK is a receptor tyrosine kinase that mediates the immunologically silent phagocytic uptake of diverse types of cellular debris. Highly expressed on the surface of microglial cell, MerTK is of importance in brain development, homeostasis, plasticity, and disease. Yet, involvement of this receptor in the clearance of protein aggregates that accumulate with aging and in neurodegenerative diseases has yet to be defined. The current study explored the function of MerTK in the microglial uptake of alpha-synuclein fibrils which play a causative role in the pathobiology of synucleinopathies. Using human primary and induced pluripotent stem cell-derived microglia, the MerTK- dependence of alpha-synuclein fibril internalization was investigated in vitro . Relevance of this pathway to synucleinopathies was assessed by analyzing MerTK expression in patient-derived cells and tissues. Pharmacological inhibition of MerTK and siRNA-mediated MERTK knockdown both caused a decreased rate of alpha-synuclein fibril internalization by human microglia. Consistent with the immunologically silent nature of MerTK-mediated phagocytosis, alpha-synuclein fibril internalization did not induce secretion of pro-inflammatory cytokines from microglia. In addition, burden analysis in two independent patient cohorts revealed a significant association between rare functionally deleterious MERTK variants and Parkinson’s disease in one of the cohorts ( p = 0.002). Accordingly, MERTK expression was significantly upregulated in nigral microglia from Parkinson’s disease/Lewy body dementia patients compared to those from non-neurological control donors in a single-nuclei RNA-sequencing dataset ( p = 5.08 × 10 - 21 ), and MerTK protein expression positively correlated with alpha-synuclein level in human cortex lysates ( p = 0.0029). Taken together, our findings define a novel role for MerTK in mediating the uptake of alpha-synuclein aggregates by human microglia, with possible involvement in limiting alpha-synuclein spread in synucleinopathies such as Parkinson’s disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.038
GPT teacher head0.245
Teacher spread0.207 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes2
Has abstractyes

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