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Record W4327893774 · doi:10.1094/pdis-10-22-2492-pdn

First Report of <i>Puccinia lagenophorae</i> on <i>Senecio vulgaris</i> in Pennsylvania

2023· article· en· W4327893774 on OpenAlexaboutno aff
R. Harvey, Donald D. Davis, D. Rabern Simmons, M. Catherine Aime

Bibliographic record

VenuePlant Disease · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicYeasts and Rust Fungi Studies
Canadian institutionsnot available
Fundersnot available
KeywordsBiologyWeedOrange (colour)SenecioPucciniaBotanyRust (programming language)Host (biology)Ornamental plantHorticultureEcology

Abstract

fetched live from OpenAlex

Common groundsel (Senecio vulgaris L.), is an aster native to Eurasia and is now a common weed in gardens, roadsides and vacant lots worldwide. In 2001, Scholler and Toike were first to report that common groundsel was a host for the rust fungus Puccinia lagenophorae Cooke in North America (Scholler and Toike 2001). This report from California was followed by reports of P. lagenophorae infections on common groundsel in New York, Oklahoma, and Oregon (Little-field et al. 2005). In 2007, Bruckart et al. published the first report of this host-pathogen combi-nation in Canada (Bruckart et al. 2007). To our knowledge, there are no published reports of P. lagenophorae on common groundsel in Pennsylvania (Farr and Rossman 2022). In May 2022, symptomatic common groundsel plants were observed in Biglerville, Adams Co., southern Penn-sylvania (N 39.9268047, E 77.2473878). Host plants exhibited conspicuous aecia on deformed stems (Fig. 1). Disease symptomology and morphology were consistent with P. langenophorae (Scholler and Toike 2001). P. lagenophorae is an autoecious rust that forms aecia and telia, but only aecia are typically formed on Senecio spp.; telia were not noted during our observations. Aecia were orange, cup-shaped, bordered by fragmented recurved peridia (Fig. 1), and they had mean diameters 262.9 ± 20.9 X 175.2 ± 22.2 μm (n = 20). Aeciospores were orange, oval, with mean diameters of 16.5 ± 0.97 X 11.5 ± 1.08 μm (n = 20). Fungal DNA was extracted from symptomatic stems. Polymerase chain reaction and sequencing of the 28S region of the nuclear ribosomal DNA repeat were conducted with primers Rust2inv and LR6 following protocols in Aime (2006). The sequence shared 100% identity (909 / 909 bp) with 8 sequences of P. la-genphorae in GenBank, including one on Ozothamnus cordatus from Perth, Western Australia, Australia (KF690699), vouchered in the Queensland Plant Pathology Herbarium (BRIP 57770), Brisbane, Queensland, Australia. A voucher specimen has been preserved in the Arthur Fungari-um at Purdue University (PUR N24039) with corresponding 28S sequence (GenBank accession OP718536).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.149
Threshold uncertainty score0.481

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.234
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designNot applicable
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes1
Has abstractyes

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