MétaCan
Menu
← Back to cohort

Genetic loci on New Zealand black chromosome 1 lead to increased generation of T follicular helper and TH17 cells (47.23)

2011· article· en· W4329790 on OpenAlexaff
Nafiseh Talaei, Carolina Landolt-Marticorena, Babak Noamani, Evelyn Pau, Nan Chang, Joan Wither

Bibliographic record

VenueThe Journal of Immunology · 2011
Typearticle
Languageen
FieldImmunology and Microbiology
TopicT-cell and B-cell Immunology
Canadian institutionsToronto Western HospitalUniversity of Toronto
Fundersnot available
KeywordsBiologyCongenicGerminal centerImmunologyAdoptive cell transferFollicular phaseAntibodyT cellB cellGeneticsGeneImmune system

Abstract

fetched live from OpenAlex

Abstract Genetic loci on NZB c1 lead to antinuclear antibody (Ab) production and glomerulonephritis (GN). Using subcongenic lines, we found at least 5 genetic loci within a 35-106cM interval modulate disease. Notably, mice with a 70-100cM interval (c1(70-100cM)) develop high titre anti-dsDNA Ab, increased numbers of large germinal centers and severe GN a characteristic feature of lupus-prone mice with abnormalities of T follicular helper (TFH) and Th17 cells. In this study we determined whether variations in disease severity in c1 subcongenic mice are associated with differences in these subsets. The proportion of splenic TFH cells was significantly increased in c1(70-100) mice. Splenocytes from all c1 congenic mouse strains demonstrated increased production of IL-21 and IL-17 following anti-CD3/CD28 crosslinking which was greatest in c1(70-100) mice. The majority of IL-21 producing cells were TFH, many of which also secreted IFN-γ, but not IL-17. Immunization of 8-wk-old pre-autoimmune mice with ovalbumin (OVA) led to increased generation of TFH and Th17 cells in c1 (70-100) mice. This appeared to result in part from altered T cell function, as adoptively transferred OVA-specific TCR transgenic c1(70-100) T cells and naïve c1(70-100) T cells cultured in-vitro, demonstrated enhanced differentiation to TFH and IL-17-producing cells. Thus, genetic loci on NZB c1 promote differentiation of T cells to TFH and Th17 cells and this capacity correlates with the severity of disease.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.008
Threshold uncertainty score0.027

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.000
Science and technology studies0.0010.001
Scholarly communication0.0000.000
Open science0.0000.001
Research integrity0.0010.001
Insufficient payload (model declined to judge)0.0080.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.021
GPT teacher head0.214
Teacher spread0.193 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2011
Admission routes1
Has abstractyes

Explore more

Same venueThe Journal of Immunology→Same topicT-cell and B-cell Immunology→French-language works237,207→