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In vivo MALDI-TOF markers for early detection of Aleutian disease (AD) among the AD virus infected mink

2012· book-chapter· en· W43385359 on OpenAlexaff
Arnost Cepica, Abdul Hamid Zargar, Bassim M. S. A. Mohamed, Ichiro Iwamoto

Bibliographic record

VenueWageningen Academic Publishers eBooks · 2012
Typebook-chapter
Languageen
FieldMedicine
TopicCytomegalovirus and herpesvirus research
Canadian institutionsUniversity of Prince Edward Island
Fundersnot available
KeywordsMinkBiologyVirologyIn vivoVirusGeneticsEcology

Abstract

fetched live from OpenAlex

A significant proportion of infected mink of non-Aleutian genotype naturally resists progression to immune complex disease. The nature of the AD resistance is presumably genetic. While hypergammaglubulinemia can be insensitively detected by an iodine test, more sensitive diagnosis of hyper-γ globulinemia and of other serum protein parameters associated with an immune-complex disease is currently cost prohibitive, time consuming, and laborious. Thus, practical, cost effective, sensitive, and high throughput tests for in vivo markers of disease vs. health in AD virus infected animals are currently not available. Such markers could have potential practical use in selection of AD virus infected animals for disease resistance. In this study, initially, parameters for serum protein MALDI-TOF serum analysis were established, and subsequently serum proteins of infected mink (CIEP positive) and mink from ADV uninfected farms were profiled by MALDI-TOF spectrometry. We determined the albumin-γ globulin (A/γ G) ratios and albumin-C reactive protein (A/C) ratios associated with health and disease, and furthermore we identified a 76Kda protein, associated exclusively with disease, i.e. with pathological A/ γ G ratio. We concluded that MALDI-TOF profiles of CIPE positive animals provide practical and cost effective tool for selection of breeders for AD resistant phenotype, which could in turn facilitate ‘on farm resistance breeding programs’.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.030
GPT teacher head0.286
Teacher spread0.256 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations3
Published2012
Admission routes1
Has abstractyes

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