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Record W4360755739 · doi:10.1111/nph.14419

Conservation vs divergence in <i>LEAFY</i> and <i>APETALA1</i> functions between <i>Arabidopsis thaliana</i> and <i>Cardamine hirsuta</i>

2017· article· en· W4360755739 on OpenAlexfundno aff
Marie Monniaux, Sarah M. McKim, Maria Cartolano, Emmanuel Thévenon, François Parcy, Miltos Tsiantis, Angela Hay

Bibliographic record

VenueNew Phytologist · 2017
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicPlant Molecular Biology Research
Canadian institutionsnot available
FundersNatural Sciences and Engineering Research Council of CanadaDirectorate for Biological SciencesRoyal SocietyBiotechnology and Biological Sciences Research CouncilFederation of European Biochemical SocietiesMax-Planck-GesellschaftAgence Nationale de la RechercheEuropean Molecular Biology Organization
KeywordsLeafyBiologyArabidopsis thalianaBotanyHomeotic geneMutantArabidopsisMeristemGeneGeneticsShoot

Abstract

fetched live from OpenAlex

Summary A conserved genetic toolkit underlies the development of diverse floral forms among angiosperms. However, the degree of conservation vs divergence in the configuration of these gene regulatory networks is less clear. We addressed this question in a parallel genetic study between the closely related species Arabidopsis thaliana and Cardamine hirsuta . We identified leafy ( lfy ) and apetala1 ( ap1 ) alleles in a mutant screen for floral regulators in C. hirsuta . C. hirsuta lfy mutants showed a complete homeotic conversion of flowers to leafy shoots, mimicking lfy ap1 double mutants in A. thaliana . Through genetic and molecular experiments, we showed that AP 1 activation is fully dependent on LFY in C. hirsuta , by contrast to A. thaliana . Additionally, we found that LFY influences heteroblasty in C. hirsuta , such that loss or gain of LFY function affects its progression. Overexpression of UNUSUAL FLORAL ORGANS also alters C. hirsuta leaf shape in an LFY ‐dependent manner. We found that LFY and AP 1 are conserved floral regulators that act nonredundantly in C. hirsuta , such that LFY has more obvious roles in floral and leaf development in C. hirsuta than in A. thaliana .

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.038
GPT teacher head0.263
Teacher spread0.225 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations34
Published2017
Admission routes1
Has abstractyes

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