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Record W4362606390 · doi:10.1038/s41586-023-05874-3

Lung adenocarcinoma promotion by air pollutants

2023· article· en· W4362606390 on OpenAlexafffund
William Hill, Emilia L. Lim, Clare E. Weeden, Claudia Lee, Marcellus Augustine, Kezhong Chen, Feng‐Che Kuan, Fabio Marongiu, Edward J. Evans, David A. Moore, Felipe Silva Rodrigues, Oriol Pich, Björn Bakker, Hongui Cha, Renelle Myers, Febe van Maldegem, Jesse Boumelha, Selvaraju Veeriah, Andrew Rowan, Cristina Naceur‐Lombardelli, Takahiro Karasaki, Monica Sivakumar, Swapnanil De, Deborah R. Caswell, A. Nagano, James R. Black, Carlos Martínez‐Ruiz, Min Hyung Ryu, Ryan D. Huff, Shijia Li, Marie-Julie Favé, Alastair Magness, Alejandro Suárez‐Bonnet, Simon L. Priestnall, Margreet Lüchtenborg, Katrina Lavelle, Joanna Pethick, Steven J. Hardy, Fiona E. McRonald, Meng‐Hung Lin, Clara I. Troccoli, Moumita Ghosh, York E. Miller, Daniel T. Merrick, Robert L. Keith, Maise Al Bakir, Chris Bailey, Mark S. Hill, Lao H. Saal, Yilun Chen, Anthony M. George, Christopher Abbosh, Nnennaya Kanu, Se‐Hoon Lee, Nicholas McGranahan, Christine D. Berg, Peter Sasieni, Richard S. Houlston, Clare Turnbull, Stephen Lam, Philip Awadalla, Eva Grönroos, Julian Downward, Tyler Jacks, Christopher Carlsten, Ilaria Malanchi, Allan Hackshaw, Kevin Litchfield, J.F. Lester, Amrita Bajaj, Apostolos Nakas, Azmina Sodha-Ramdeen, Keng Ang, Mohamad Tufail, Mohammed Fiyaz Chowdhry, Molly Scotland, Rebecca Boyles, Sridhar Rathinam, Claire Wilson, Domenic Marrone, Sean Dulloo, Dean A. Fennell, Gurdeep Matharu, Jacqui Shaw, Joan Riley, Lindsay Primrose, Ekaterini Boleti, Heather Cheyne, Mohammed S. Khalil, Shirley Richardson, Tracey Cruickshank, Gillian Price, Keith M. Kerr, Sarah Benafif, Kayleigh Gilbert, Babu Naidu, Akshay J. Patel, Aya Osman, Christer Lacson, Gerald Langman, Helen Shackleford, Madava Djearaman, Salma Kadiri, Gary Middleton, Angela Leek, Jack Davies Hodgkinson, Nicola Totten, Ángeles Montero, Elaine Smith, Eustace Fontaine, Felice Granato, Helen Doran, Juliette Novasio, Kendadai Rammohan, Leena Dennis Joseph, Rajesh Shah, Stuart Moss, Vijay Joshi, Philip Crosbie, Fábio Gomes, Kate Brown, Mathew Carter, Anshuman Chaturvedi, Lynsey Priest, Pedro Oliveira, Colin R. Lindsay, Fiona Blackhall, Matthew Krebs, Yvonne Summers, Alexandra Clipson, Jonathan Tugwood, Alastair Kerr, Dominic G. Rothwell, Elaine Kilgour, Caroline Dive, Hugo J.W.L. Aerts, Roland F. Schwarz, Tom L. Kaufmann, Gareth A. Wilson, Rachel Rosenthal, Peter Van Loo, Nicolai J. Birkbak, Zoltán Szállási, Judit Kisistók, Mateo Sokač, Roberto Salgado, Miklós Dióssy, Jonas Demeulemeester, Abigail Bunkum, Alexander M. Frankell, Angeliki Karamani, Antonia Toncheva, Ariana Huebner, Benny Chain, Brittany Campbell, Carla Castignani, Clare Puttick, Corentin Richard, Crispin T. Hiley, David R. Pearce, Despoina Karagianni, Dhruva Biswas, Dina Levi, Elena Hoxha, Elizabeth Larose Cadieux, Emma Colliver, Emma Nye, Felip Gálvez-Cancino, Foteini Athanasopoulou, Francisco Gimeno-Valiente, George Kassiotis, Georgia Stavrou, Gerasimos Mastrokalos, Hao-Ran Zhai, Helen L. Lowe, Ignacio Matos, Jacki Goldman, James L. Reading, Javier Herrero, Jayant K. Rane, Jérôme Nicod, Jie Min Lam, John A. Hartley, Karl S. Peggs, Katey S.S. Enfield, Kayalvizhi Selvaraju, Kerstin Thol, Kevin W. Ng, Krijn K. Dijkstra, Kristiana Grigoriadis, Krupa Thakkar, Leah Ensell, Mansi Shah, Marcos Vasquez Duran, Maria Litovchenko, Mariana Werner Sunderland, Michelle Dietzen, Michelle Leung, Mickael Escudero, Mihaela Angelova, Miljana Tanić, Olga Chervova, Olivia Lucas, Othman Al‐Sawaf, Paulina Prymas, Philip Hobson, Piotr Pawlik, Richard Stone, Robert B. Bentham, Robert E. Hynds, Roberto Vendramin, Sadegh Saghafinia, Saioa López, Samuel Gamble, Seng Kuong Anakin Ung, Sergio A. Quezada, Sharon Vanloo, Simone Zaccaria, Sonya Hessey, Sophia Ward, Stefan Boeing, Stephan Beck, Supreet Kaur Bola, Tamara Denner, Teresa Marafioti, Thanos P. Mourikis, Thomas B.K. Watkins, Victoria J. Spanswick, Vittorio Barbè, Wei-Ting Lu, Wing Kin Liu, Yin Wu, Yutaka Naito, Zoe Ramsden, Catarina Veiga, Gary Royle, Charles‐Antoine Collins‐Fekete, Francesco Fraioli, Paul Ashford, Tristan Clark, Martin Förster, Siow Ming Lee, Elaine Borg, Mary Falzon, Dionysis Papadatos-Pastos, James M. Wilson, Tanya Ahmad, Alexander James Procter, Asia Ahmed, Magali N. Taylor, Arjun Nair, David Lawrence, Davide Patrini, Neal Navani, Ricky M. Thakrar, Sam M. Janes, Emilie Martinoni Hoogenboom, Fleur Monk, James W. Holding, Junaid Choudhary, Kunal Bhakhri, Marco Scarci, Nikolaos Panagiotopoulos, Pat Gorman, Reena Khiroya, Robert Stephens, Yien Ning Sophia Wong, Steve Bandula, Abigail Sharp, Sean Smith, Nicole Gower, Harjot Kaur Dhanda, Kitty S. Chan, Camilla Pilotti, Rachel Leslie, Anca Grapa, Hanyun Zhang, Khalid AbdulJabbar, Xiaoxi Pan, Yinyin Yuan, David Chuter, Mairead MacKenzie, Serena Chee, Aiman Alzetani, Judith Cave, Lydia Scarlett, Jennifer Richards, Papawadee Ingram, Silvia Austin, Eric Lim, Paulo De Sousa, Simon Jordan, Alexandra Rice, Hilgardt Raubenheimer, Harshil Bhayani, Lyn Ambrose, Anand Devaraj, Hema Chavan, Sofina Begum, Silviu Buderi, Daniel Kaniu, Mpho Malima, Sarah Booth, Andrew G. Nicholson, Nadia Fernandes, Pratibha Shah, Chiara Proli, Madeleine Hewish, Sarah Danson, Michael Shackcloth, Lily Robinson, Peter Russell, Kevin G. Blyth, Craig Dick, John Le Quesne, Alan Kirk, Mo Asif, Rocco Bilancia, Nikos Kostoulas, Mathew Thomas, James DeGregori, Mariam Jamal‐Hanjani, Charles Swanton

Bibliographic record

VenueNature · 2023
Typearticle
Languageen
FieldEnvironmental Science
TopicAir Quality and Health Impacts
Canadian institutionsOntario Institute for Cancer ResearchVancouver Coastal HealthVancouver Coastal Health Research InstituteUniversity of British Columbia
FundersLinda Crnic Institute for Down Syndrome, University of Colorado School of Medicine, Anschutz Medical CampusNational Cancer InstituteJapan Society for the Promotion of ScienceEngineering and Physical Sciences Research CouncilHorizon 2020 Framework ProgrammeGenentechPeking University People's HospitalOno PharmaceuticalUniversity College London Hospitals NHS Foundation TrustChinese Academy of Medical SciencesMedical Research CouncilNational Research Foundation of KoreaCancerfondenVetenskapsrådetNational Natural Science Foundation of ChinaPeking UniversityChang Gung Medical FoundationNational Institute for Health and Care ResearchAstraZenecaInvitaeRevolution MedicinesAstex PharmaceuticalsLifeArcFrancis Crick InstituteWellcome TrustCancer Research UKUniversity College LondonStand Up To CancerMinistry of Science and ICT, South KoreaLUNGevity FoundationEntertainment Industry FoundationBristol-Myers SquibbEuropean Respiratory SocietyPfizerNational Institutes of HealthRosetrees TrustEuropean CommissionBreast Cancer Research FoundationNational Research FoundationAmgenAmerican Association for Cancer ResearchGénome QuébecKorea Health Industry Development InstituteInternational Association for the Study of Lung CancerU.S. Department of Veterans Affairs
KeywordsLung cancerKRASCarcinogenesisCancer researchLungAdenocarcinomaMedicineCarcinogenCancerImmunologyOncologyBiologyInternal medicineGeneticsColorectal cancer

Abstract

fetched live from OpenAlex

A complete understanding of how exposure to environmental substances promotes cancer formation is lacking. More than 70 years ago, tumorigenesis was proposed to occur in a two-step process: an initiating step that induces mutations in healthy cells, followed by a promoter step that triggers cancer development1. Here we propose that environmental particulate matter measuring ≤2.5 μm (PM2.5), known to be associated with lung cancer risk, promotes lung cancer by acting on cells that harbour pre-existing oncogenic mutations in healthy lung tissue. Focusing on EGFR-driven lung cancer, which is more common in never-smokers or light smokers, we found a significant association between PM2.5 levels and the incidence of lung cancer for 32,957 EGFR-driven lung cancer cases in four within-country cohorts. Functional mouse models revealed that air pollutants cause an influx of macrophages into the lung and release of interleukin-1β. This process results in a progenitor-like cell state within EGFR mutant lung alveolar type II epithelial cells that fuels tumorigenesis. Ultradeep mutational profiling of histologically normal lung tissue from 295 individuals across 3 clinical cohorts revealed oncogenic EGFR and KRAS driver mutations in 18% and 53% of healthy tissue samples, respectively. These findings collectively support a tumour-promoting role for PM2.5 air pollutants and provide impetus for public health policy initiatives to address air pollution to reduce disease burden. Combination of epidemiology, preclinical models and ultradeep DNA profiling of clinical cohorts unpicks the inflammatory mechanism by which air pollution promotes lung cancer

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.008

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.001
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.020
GPT teacher head0.310
Teacher spread0.290 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations761
Published2023
Admission routes2
Has abstractyes

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