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Triacontane and Behenyl Lignocerate Molecular Tilting in Crystals: Theory, Monte Carlo Simulations and Predictions

2023· preprint· en· W4363673167 on OpenAlexafffund
Joseph Cooney, Silvana Martini, David A. Pink, Fernanda Peyronel

Bibliographic record

Venuenot available
Typepreprint
Languageen
FieldAgricultural and Biological Sciences
TopicFood Chemistry and Fat Analysis
Canadian institutionsUniversity of GuelphSt. Francis Xavier University
FundersSt. Francis Xavier UniversityUniversity of GuelphUtah Agricultural Experiment StationNatural Sciences and Engineering Research Council of CanadaUtah State University
KeywordsMoleculeMonte Carlo methodTilt (camera)MonolayerWork (physics)Materials sciencePlane (geometry)Statistical physicsCrystallographyPhysicsChemical physicsChemistryComputational chemistryMolecular physicsNanotechnologyThermodynamicsMathematicsQuantum mechanicsGeometry

Abstract

fetched live from OpenAlex

Oleogelators are molecules that, when combined with edible oils can form semi-solid materials. Although many molecules have been tried as oleogelators in the last 20 years, much is still unknown. Here, the molecular structure of two possible oleogelators: triacontane (TC) and behenyl lignocerate (BL) were studied using a mathematical model for each molecule and carrying out computer simulation using the Metropolis Monte Carlo (MMC) algorithm in which the only interaction is via Lennard-Jones dispersion forces. The computer simulation explored the possibility of having either rigidly-extended molecules or twisted ones via the formation of gauche bonds. The results showed that both TL and BL molecules create a monolayer that did not include any gauche bond so that all molecules were effectively rigidly extended. The effective thickness of the monolayer was compared with experimental data and with the predictions of Peyronel et al. (in review) which assumed that the molecules were rigidly-extended. The work reported here justified that assumption. The conclusion was that the TC and BL molecules must be packed with a tilt angle in relation to the methyl group plane to match the experimental data. The angle of TC tilt was calculated to be ~27° which essentially confirms that reported by Peyronel et al. (in review).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: Simulation or modeling
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.012
Threshold uncertainty score0.025

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.001
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0010.001
Science and technology studies0.0010.001
Scholarly communication0.0010.001
Open science0.0010.000
Research integrity0.0020.001
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.029
GPT teacher head0.245
Teacher spread0.216 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes2
Has abstractyes

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