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Record W4365420443 · doi:10.5376/ija.2023.13.0001

Cloning and Characterization of Aquaporins 11 and Its Expression Analysis under Molt Cycle in <i>Eriocheir sinensis</i>

2023· article· en· W4365420443 on OpenAlexvenueno aff
Long Zhang, Yangyang Pang, Hang Yang, Zhigang Yang

Bibliographic record

VenueInternational Journal of Aquaculture · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicIon Transport and Channel Regulation
Canadian institutionsnot available
Fundersnot available
KeywordsChinese mitten crabComplementary DNABiologyOpen reading frameMolecular biologyAquaporinRapid amplification of cDNA endsHepatopancreasGene expressionMolecular cloningEriocheirGenePeptide sequenceGeneticsBiochemistryFishery

Abstract

fetched live from OpenAlex

Aquaporins play important roles in water molecule transport, ion transport, and osmotic pressure regulation. In this study, the full-length cDNA of aquaporin from Chinese mitten crab ( Eirocheir sinensis ) was cloned for first time using reverse transcription-polymerase chain reaction and rapid amplification of cDNA ends analyses. The full-length of AQP11 cDNA is 1746bp, with a 463bp 5’-untranslated region (UTR), a 476bp 3’-UTR, and an open reading frame (ORF) of 807 bp which encodes a 269 amino acid polypeptide. The molecular mass of the predicted protein is 29.46 kDa with an estimated PI of 5.38. Bioinformatics software analysis revealed that AQP11 gene contains 4 transmembrane domains, 2 NPV structural units. Homologous analysis showed that AQP11 of Eirocheir sinensis  has the highest homology to AQP11 of Litopenaeus vanname i .  Real-time quantitative RT-PCR showed that AQP11 gene could be detected in all tested tissues of Eirocheir sinensis , with the highest expression level in intestine, followed by the brain, muscle and thoracic ganglion, and the lowest expression level in the hepatopancreas, gills and blood. In the intestinal, the expression of AQP11 was significantly lower at the intermolt stage (stages C) and premolt stage (stage D), significantly enhanced and reached the maximal level at the ecdysis stage (stage E). On the other hand, the expression of AQP11 gene in muscle showed low expression in the intermolt stage (stage C), and it was increased gradually at the premolt stage (stage D), significantly enhanced and reached the maximal level at the ecdysis stage (E stage), and then reaching the postmolt stage(AB stage) decline. In summary, our results indicate that AQP11 may play an important role in molting of Enirocheir sinensis.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.451
Threshold uncertainty score0.332

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.008
GPT teacher head0.244
Teacher spread0.236 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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