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Record W4372349325 · doi:10.1101/2023.05.04.23289196

Association between circulating inflammatory markers and adult cancer risk: a Mendelian randomization analysis

2023· preprint· en· W4372349325 on OpenAlexfundno aff
James Yarmolinsky, Jamie Robinson, Daniela Mariosa, Ville Karhunen, Jian Huang, Niki Dimou, Neil Murphy, Kimberley Burrows, Emmanouil Bouras, Karl Smith‐Byrne, Sarah J. Lewis, Tessel E. Galesloot, Lambertus A. Kiemeney, Sita H. Vermeulen, Paul Martin, Demetrius Albanes, Lifang Hou, Polly A. Newcomb, Emily White, Alicja Wolk, Anna H. Wu, Loı̈c Le Marchand, Amanda I. Phipps, Daniel D. Buchanan, Sizheng Steven Zhao, Dipender Gill, Stephen J. Chanock, Mark P. Purdue, George Davey Smith, Paul Brennan, Karl‐Heinz Herzig, Marjo‐Riitta Järvelin, Abbas Dehghan, Mattias Johansson, Marc J. Gunter, Richard M. Martin

Bibliographic record

VenuemedRxiv · 2023
Typepreprint
Languageen
FieldMedicine
TopicInflammatory Biomarkers in Disease Prognosis
Canadian institutionsnot available
FundersDeutsche KrebshilfeSchool of Public Health, Imperial College LondonKnut och Alice Wallenbergs StiftelseWorld Cancer Research FundVersus ArthritisInstituto de Salud Carlos IIIXunta de GaliciaMutuelle Générale de l'Education NationaleNational Institute for Health and Care ResearchAgència de Gestió d'Ajuts Universitaris i de RecercaChonnam National University Hwasun HospitalInstitut National Du CancerAssociazione Italiana per la Ricerca sul CancroVetenskapsrådetImperial College LondonGeneralitat de CatalunyaUniversity Hospitals Bristol NHS Foundation TrustCanadian Institutes of Health ResearchCancerfondenGrantová Agentura České RepublikyInstitut Gustave-RoussyCentres de Recerca de CatalunyaUmeå UniversitetChonnam National UniversityNIHR Imperial Biomedical Research CentreCanadian Cancer Society Research InstituteInstitut National de la Santé et de la Recherche MédicaleMinisterstvo Zdravotnictví Ceské RepublikyEuropean CommissionNational Cancer InstituteFundación Científica Asociación Española Contra el CáncerBundesministerium für Bildung und ForschungDivision of Cancer Prevention, National Cancer InstituteUniversity of CambridgeCancer Research UKNIHR Bristol Biomedical Research CentreNational Institutes of HealthMike and Josie Harper Cancer Research InstitutePelotoniaUniversity of BristolGénome QuébecLigue Contre le CancerDeutsches KrebsforschungszentrumMcGill UniversityUniverzita Karlova v PrazeMedical Research CouncilDepartment of Health and Social CareU.S. Department of Health and Human Services
KeywordsMendelian randomizationAssociation (psychology)MedicineOncologyMendelian inheritanceCancerGeneticsInternal medicineBiologyGenotypeGenePsychologyGenetic variants

Abstract

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Abstract Background Tumour-promoting inflammation is a “hallmark” of cancer and conventional epidemiological studies have reported links between various inflammatory markers and cancer risk. The causal nature of these relationships and, thus, the suitability of these markers as intervention targets for cancer prevention is unclear. Methods We meta-analysed 6 genome-wide association studies of circulating inflammatory markers comprising 59,969 participants of European ancestry. We then used combined cis -Mendelian randomization and colocalisation analysis to evaluate the causal role of 66 circulating inflammatory markers in risk of 30 adult cancers in 338,162 cancer cases and up to 824,556 controls. Genetic instruments for inflammatory markers were constructed using genome-wide significant ( P < 5.0 x 10 -8 ) cis -acting SNPs (i.e. in or ±250 kb from the gene encoding the relevant protein) in weak linkage disequilibrium (LD, r 2 < 0.10). Effect estimates were generated using inverse-variance weighted random-effects models and standard errors were inflated to account for weak LD between variants with reference to the 1000 Genomes Phase 3 CEU panel. A false discovery rate (FDR)-corrected P -value (“ q -value”) < 0.05 was used as a threshold to define “strong evidence” to support associations and 0.05 ≤ q -value < 0.20 to define “suggestive evidence”. A colocalisation posterior probability (PPH 4 ) > 70% was employed to indicate support for shared causal variants across inflammatory markers and cancer outcomes. Results We found strong evidence to support an association of genetically-proxied circulating pro-adrenomedullin concentrations with increased breast cancer risk (OR 1.19, 95% CI 1.10-1.29, q -value=0.033, PPH 4 =84.3%) and suggestive evidence to support associations of interleukin-23 receptor concentrations with increased pancreatic cancer risk (OR 1.42, 95% CI 1.20-1.69, q -value=0.055, PPH 4 =73.9%), prothrombin concentrations with decreased basal cell carcinoma risk (OR 0.66, 95% CI 0.53-0.81, q -value=0.067, PPH 4 =81.8%), macrophage migration inhibitory factor concentrations with increased bladder cancer risk (OR 1.14, 95% CI 1.05-1.23, q -value=0.072, PPH 4 =76.1%), and interleukin-1 receptor-like 1 concentrations with decreased triple-negative breast cancer risk (OR 0.92, 95% CI 0.88-0.97, q -value=0.15), PPH 4 =85.6%). For 22 of 30 cancer outcomes examined, there was little evidence ( q -value ≥ 0.20) that any of the 66 circulating inflammatory markers examined were associated with cancer risk. Conclusion Our comprehensive joint Mendelian randomization and colocalisation analysis of the role of circulating inflammatory markers in cancer risk identified potential roles for 5 circulating inflammatory markers in risk of 5 site-specific cancers. Contrary to reports from some prior conventional epidemiological studies, we found little evidence of association of circulating inflammatory markers with the majority of site-specific cancers evaluated.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.076
metaresearch head score (Gemma)0.085
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Simulation or modeling · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: none
Teacher disagreement score0.076
Threshold uncertainty score0.403

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0760.085
Meta-epidemiology (narrow)0.0030.001
Meta-epidemiology (broad)0.0070.015
Bibliometrics0.0040.004
Science and technology studies0.0010.002
Scholarly communication0.0020.001
Open science0.0030.002
Research integrity0.0030.003
Insufficient payload (model declined to judge)0.0090.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.019
GPT teacher head0.286
Teacher spread0.267 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designSimulation or modeling
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations9
Published2023
Admission routes1
Has abstractyes

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