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Record W4375852712 · doi:10.21203/rs.3.rs-2883575/v1

Host, reproductive, and lifestyle factors in relation to quantitative histologic metrics of the normal breast

2023· preprint· en· W4375852712 on OpenAlexaff
Mustapha Abubakar, Alyssa Klein, Shaoqi Fan, Scott M. Lawrence, Karun Mutreja, Jill E. Henry, Ruth M. Pfeiffer, Máire A. Duggan, Gretchen L. Gierach

Bibliographic record

VenueResearch Square · 2023
Typepreprint
Languageen
FieldMedicine
TopicCancer Risks and Factors
Canadian institutionsUniversity of Calgary
FundersNational Cancer InstituteNational Institutes of Health
KeywordsStromal cellAdipose tissueEpidemiologyBreast cancerConfidence intervalEpitheliumMedicineBiopsyStromaMammary glandPathologyPhysiologyBiologyInternal medicineCancerImmunohistochemistry

Abstract

fetched live from OpenAlex

Abstract Background Emerging data indicate that variations in quantitative epithelial and stromal tissue composition and their relative abundance in benign breast biopsies independently impact risk of future invasive breast cancer. To gain further insights into breast cancer etiopathogenesis, we investigated associations between epidemiological factors and quantitative tissue composition metrics of the normal breast. Methods The study participants were 4,108 healthy women ages 18-75 years who voluntarily donated breast tissue to the US-based Susan G. Komen Tissue Bank (KTB; 2008-2019). Using high-accuracy machine-learning algorithms, we quantified the percentage of epithelial, stromal, adipose, and fibroglandular tissue, as well as the proportion of fibroglandular tissue that is epithelium relative to stroma (i.e., epithelium-to-stroma proportion, ESP) on digitized hematoxylin and eosin (H&E)-stained normal breast biopsy specimens. Data on epidemiological factors were obtained from participants using a detailed questionnaire administered at the time of tissue donation. Associations between square root transformed tissue metrics and epidemiological factors were investigated using multivariable linear regression models. Results With increasing age, the amount of stromal, epithelial, and fibroglandular tissue declined and adipose tissue increased, while that of ESP demonstrated a bimodal pattern. Several epidemiological factors were associated with individual tissue composition metrics, impacting ESP as a result. Compared with premenopausal women, postmenopausal women had lower ESP [β (95% Confidence Interval (CI))= -0.28 (-0.04 to -0.013); P<0.001] with ESP peaks at 30-40 years and 60-70 years among pre- and post-menopausal women, respectively. ESP was higher among gravid than nulligravid women [β (95%CI)= 0.19 (0.08-0.30); P<0.001], increasing with increasing number of live births (P-trend <0.001). A positive family history of breast cancer was associated with higher ESP [β (95%CI)= 0.13 (0.02-0.25); P=0.02]. Further, overweight [β (95%CI)= 0.18 (0.06-0.30); P=0.004] or obese [β (95%CI)= 0.33 (0.21-0.44); P<0.0001] women had higher ESP than those with normal body mass index (BMI), while Black women had higher ESP than White women [β (95%CI)= 0.13 (0.01-0.26); P=0.03]. Conclusion Our findings provide strong epidemiological evidence on the potential role of joint variations in stromal-epithelial tissue composition in the etiopathogenesis of breast cancer and underscore the need for further research into how exposure-tissue interactions shape breast cancer development and etiologic heterogeneity.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.004
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.006

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.004
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.001
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.152
GPT teacher head0.432
Teacher spread0.280 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes1
Has abstractyes

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