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Record W4375852844 · doi:10.21203/rs.3.rs-2885147/v1

The splicing factor SRSF6 regulates AR activity and represents a potential therapeutic target in prostate cancer

2023· preprint· en· W4375852844 on OpenAlexaff
Juan M. Jiménez‐Vacas, Antonio J. Montero‐Hidalgo, Enrique Gómez‐Gómez, Prudencio Sáez-Martínez, Jesús M. Pérez‐Gómez, Antonio C. Fuentes-Fayos, Ricardo Blázquez‐Encinas, Rafael Sánchez‐Sánchez, Teresa Gonzalez-Serrano, Elena Castro, Pablo Jesús López‐Soto, Julia Carrasco‐Valiente, André Sarmento-Cabral, Antonio J. Martínez‐Fuentes, Eduardo Eyras, Justo P. Castaño, Adam Sharp, David Olmos, Manuel D. Gahete, Raúl M. Luque

Bibliographic record

VenueResearch Square · 2023
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicRNA Research and Splicing
Canadian institutionsInstitute of Cancer Research
FundersEuropean Social FundEuropean Regional Development FundInstituto de Salud Carlos IIIMinisterio de Sanidad, Servicios Sociales e IgualdadEuropean Commission
KeywordsGene silencingProstate cancerCancer researchRNA splicingBiologyMetastasisCancerTranscription factorAlternative splicingMessenger RNAGeneRNAGenetics

Abstract

fetched live from OpenAlex

Abstract Background Prostate cancer (PCa) is the fifth leading cause of cancer-related death worldwide. Finding novel therapeutic strategies to tackle PCa, especially its most advanced phenotype, named castration-resistant PCa (CRPC), is urgently needed. In this sense, although the dysregulation of the splicing process has emerged as a distinctive feature of advanced PCa, the potential role that splicing regulators may play in advanced PCa remains understudied. In this project, we aimed to explore the levels, pathophysiological role, and associated molecular landscape of the splicing factor SRSF6 in PCa.Methods SRSF6 alterations (CNA/mRNA/protein) were analyzed in eight well-characterized cohorts of PCa patients and in the Hi-MYC transgenic model. The effect of SRSF6 overexpression and silencing was tested in vitro (cell proliferation, migration, colony and tumorspheres formation), and in vivo (xenograft tumors). RNA-Seq was performed in PCa cells to analyze gene expression and splicing pattern changes in response to SRSF6 silencing.Results Our results showed that SRSF6 levels (mRNA/protein) were upregulated in PCa vs. non-tumor prostate samples, linked to clinical parameters of tumor aggressiveness (e.g., Gleason score, T-stage, perineural infiltration, metastasis at diagnosis), and associated with poor prognosis (i.e., shorter progression-free survival time) in PCa patients. Moreover, SRSF6 overexpression increased, while its silencing decreased, relevant functional parameters of aggressiveness in vitro and tumor growth in vivo. Mechanistically, SRSF6 modulation resulted in the dysregulation of key oncogenic pathways, especially AR-activity through transcriptional regulation of APPBP2 and TOP2BConclusions SRSF6 could represent a new therapeutic target to inhibit persistent AR-signaling in advanced PCa.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.050
GPT teacher head0.397
Teacher spread0.347 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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