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Record W4376269481 · doi:10.1094/pdis-01-23-0166-fe

A Global Assessment of the State of Plant Health

2023· article· en· W4376269481 on OpenAlexaff
Ivette Acuña, Jorge Andrade-Piedra, Didier Andrivon, Josep Armengol, A. Elizabeth Arnold, Jacques Avelino, Ranajit Bandyopadhyay, Clive H. Bock, Federica Bove, Tania Brenes‐Arguedas, Agnes A. Calonnec, Marcelo Carmona, Angus J. Carnegie, Nancy Castilla, Xianming Chen, Helvécio Della Coletta-Filho, Phyllis D. Coley, Kerik D. Cox, Triona Davey, Emerson M. Del Ponte, Sandra Denman, Marie-Laure Desprez-Loustau, Megan M. Dewdney, Annika Djurle, A. Drenth, Alexis Ducousso, Paul D. Esker, Komi M. Fiaboe, Paul H. Fourie, Susan J. Frankel, Pascal Frey, Sara García-Figuera, Karen A. Garrett, Maxime Guérin, G.E.St.J. Hardy, H. Hausladen, Xiaoping Hu, D. Hüberli, Jennifer Juzwik, Zhensheng Kang, L. Kenyon, Jan Kreuze, Peter Kromann, Kubiriba Jerome, Paulo Kuhnem, Jitendra Kumar, P. Lava Kumar, Marc‐Henri Lebrun, J. P. Legg, Anna L. Leon, Zhanhong Ma, George Mahuku, Robert Makinson, Cristina Marzachì, Bruce A. McDonald, N. McRoberts, Abebe Menkir, Alexey Mikaberidze, Isabel A. Munck, Andrew Nelson, Nga Thi Thu Nguyen, E. O'Gara, Peter S. Ojiambo, Alejandro Ortega‐Beltran, Pierce A. Paul, Sarah J. Pethybridge, Jean Pinon, Tod D. Ramsfield, David M. Rizzo, Vittorio Rossi, Irda Safni, Sonam Sah, Alberto Santini, Francisco Sautua, Serge Savary, Pepijn Schreinemachers, Manjari Singh, Erin R. Spear, Ramasamy Srinivasan, Leena Tripathi, Antonio Vicent Civera, Altus Viljoen, Laetitia Willocquet, Alex J. Woods, Bo-Ming Wu, Xianchun Xia, Xiangming Xu, Jonathan Yuen, Paul‐Camilo Zalamea, Changyong Zhou

Bibliographic record

VenuePlant Disease · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsNatural Resources Canada
FundersInstitut National de Recherche pour l'Agriculture, l'Alimentation et l'EnvironnementToulouse School of Economics
KeywordsEcosystem servicesAgricultureEcoregionBiosecurityFood securityRecreationAgroforestryEnvironmental resource managementBiologyEcosystem healthGeographyEcologyEnvironmental protectionEcosystemEnvironmental healthEnvironmental scienceMedicine

Abstract

fetched live from OpenAlex

The Global Plant Health Assessment (GPHA) is a collective, volunteer-based effort to assemble expert opinions on plant health and disease impacts on ecosystem services based on published scientific evidence. The GPHA considers a range of forest, agricultural, and urban systems worldwide. These are referred to as (Ecoregion × Plant System), i.e., selected case examples involving keystone plants in given parts of the world. The GPHA focuses on infectious plant diseases and plant pathogens, but encompasses the abiotic (e.g., temperature, drought, and floods) and other biotic (e.g., animal pests and humans) factors associated with plant health. Among the 33 (Ecoregion × Plant System) considered, 18 are assessed as in fair or poor health, and 20 as in declining health. Much of the observed state of plant health and its trends are driven by a combination of forces, including climate change, species invasions, and human management. Healthy plants ensure (i) provisioning (food, fiber, and material), (ii) regulation (climate, atmosphere, water, and soils), and (iii) cultural (recreation, inspiration, and spiritual) ecosystem services. All these roles that plants play are threatened by plant diseases. Nearly none of these three ecosystem services are assessed as improving. Results indicate that the poor state of plant health in sub-Saharan Africa gravely contributes to food insecurity and environmental degradation. Results further call for the need to improve crop health to ensure food security in the most populated parts of the world, such as in South Asia, where the poorest of the poor, the landless farmers, are at the greatest risk. The overview of results generated from this work identifies directions for future research to be championed by a new generation of scientists and revived public extension services. Breakthroughs from science are needed to (i) gather more data on plant health and its consequences, (ii) identify collective actions to manage plant systems, (iii) exploit the phytobiome diversity in breeding programs, (iv) breed for plant genotypes with resilience to biotic and abiotic stresses, and (v) design and implement plant systems involving the diversity required to ensure their adaptation to current and growing challenges, including climate change and pathogen invasions.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.284
Threshold uncertainty score0.247

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.013
GPT teacher head0.276
Teacher spread0.264 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations25
Published2023
Admission routes1
Has abstractyes

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