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Perspective of a Pathologist on Benchmark Strategies for Artificial Intelligence Development in Organ Transplantation

2023· review· en· W4376473362 on OpenAlexaff
Albino Eccher, Fabio Pagni, Stefano Marletta, Enrico Munari, Angelo Paolo Dei Tos

Bibliographic record

VenueCritical Reviews™ in Oncogenesis · 2023
Typereview
Languageen
FieldMedicine
TopicPrenatal Screening and Diagnostics
Canadian institutionsUniversity Hospital Foundation
Fundersnot available
KeywordsInterpretabilityDigital pathologyTransplantationMedicineProcess (computing)Computer scienceGold standard (test)Intensive care medicineArtificial intelligenceMedical physicsPathologySurgeryRadiology

Abstract

fetched live from OpenAlex

Transplant pathology of donors is a highly specialized field comprising both the evaluation of organ donor biopsy for the oncological risk transmission and to guide the organ allocation. Timing is critical in transplant procurement since organs must be recovered as soon as possible to ensure the best possible outcome for the recipient. To all this is added the fact that the evaluation of a donor causes difficulties in many cases and the impact of these assessments is paramount, considering the possible recovery of organs that would have been erroneously discarded or, conversely, the possibly correct discarding of donors with unacceptable risk profiles. In transplant pathology histology is still the gold standard for diagnosis dictating the subsequent decisions and course of clinical care. Digital pathology has played an important role in accelerating healthcare progression and nowadays artificial intelligence powered computational pathology can effectively improve diagnostic needs, supporting the quality and safety of the process. Mapping the shape of the journey would suggest a progressive approach from supervised to semi/unsupervised models, which would involve training these models directly for clinical endpoints. In machine learning, this generally delivers better performance, compensating for a potential lack in interpretability. With planning and enough confidence in the performance of learning-based methods from digital pathology and artificial intelligence, there is great potential to augment the diagnostic quality and correlation with clinical endpoints. This may improve the donor pool and vastly reduce diagnostic and prognostic errors that are known but currently are unavoidable in transplant donor pathology.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.010
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch, Meta-epidemiology (narrow)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Other design · Consensus signal: none
GenreCandidate signal: Review · Consensus signal: Review
Teacher disagreement score0.908
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.010
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0020.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.254
GPT teacher head0.478
Teacher spread0.225 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

Study designOther design
Domainnot available
GenreReview

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations5
Published2023
Admission routes1
Has abstractyes

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