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Record W4376867267 · doi:10.21203/rs.3.rs-2930504/v1

A Pine in Distress: How Infection by Different Pathogenic Fungi Affect Lodgepole Pine Defenses

2023· preprint· en· W4376867267 on OpenAlexaffabout
Rashaduz Zaman, Federico Antonioli, Ateeq Shah, Aziz Ullah, Nadir Erbilgin

Bibliographic record

VenueResearch Square · 2023
Typepreprint
Languageen
FieldEnvironmental Science
TopicForest Insect Ecology and Management
Canadian institutionsUniversity of Alberta
Fundersnot available
KeywordsPinus contortaCankerBiologyHerbivorePhloemMountain pine beetleBotanyOphiostomaBark beetleHost (biology)DendroctonusLonghorn beetleBark (sound)EcologyFungus

Abstract

fetched live from OpenAlex

Abstract In North America, lodgepole pine is frequently subjected to attacks by various biotic disturbances that compromise its ability to defend against subsequent attacks by insect herbivores. We investigated whether infections of lodgepole pine by different pathogenic fungal species have varying effects on its defense chemistry. We selected two common pathogens: Atropellis canker and western gall rust, affecting mature lodgepole pine trees in western Canada. We also included three ophiostomoid fungi associated with the mountain pine beetle, Grosmannia clavigera, Ophiostoma montium, and Leptographium longiclavatum because symbiotic fungi are commonly used to investigate induced defenses of host trees of bark beetles. We collected phloem samples from lodgepole pine trees infected with the rust or the canker, and healthy lodgepole pine trees in the same stand. We also inoculated mature lodgepole pine trees with the three fungal symbionts and collected phloem two weeks later when the defense chemistry at its highest level. All samples were analyzed for their terpene composition in gas chromatograph/mass spectrometry. Different pathogenic fungal species differentially altered the terpene chemistry of lodgepole pine trees. Western gall rust and the beetle-fungal symbionts altered the tree terpene chemistry in a similar fashion while trees responded to the infection by the Atropellis canker differently. Our study highlights the importance of considering specific biotic stress agents in tree susceptibility or resistance to the subsequent biotic attacks by insect herbivores, such as mountain pine beetle.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.010

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0010.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.039
GPT teacher head0.326
Teacher spread0.287 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes2
Has abstractyes

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