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Record W4377825192 · doi:10.1002/tax.12936

<i>Tragopogon pratensis</i>: Multiple introductions to North America, circumscription, and the formation of the allotetraploid <i>T. miscellus</i>

2023· article· en· W4377825192 on OpenAlexaboutno aff
Douglas E. Soltis, Evgeny V. Mavrodiev, Vladimir Brukhin, Eric H. Roalson, Dirk C. Albach, Grant T. Godden, Yuri E. Alexeev, Matthew A. Gitzendanner, Craig C. Freeman, Víctor N. Suárez‐Santiago, Pamela S. Soltis

Bibliographic record

VenueTaxon · 2023
Typearticle
Languageen
FieldAgricultural and Biological Sciences
TopicChromosomal and Genetic Variations
Canadian institutionsnot available
FundersRussian Foundation for Basic ResearchNational Science Foundation
KeywordsBiologyPolyphylyRange (aeronautics)BotanyPhylogenetic treeEvolutionary biologyCladeGeneticsGene

Abstract

fetched live from OpenAlex

Abstract Tragopogon (Asteraceae) includes two recently and repeatedly formed allopolyploids, T. mirus and T. miscellus , both of which formed in western North America following the human‐mediated introduction of three diploids from Europe: T. dubius , T. porrifolius , and T. pratensis . We recently investigated the genetics of the introduction history to North America of T. dubius , the shared parent of both allopolyploids. Here, we investigate the introduction of T. pratensis into North America, the second diploid parent of T. miscellus . Using ITS sequence data, we found that T. pratensis as currently defined in the narrow sense is polyphyletic and comprises at least four different major ITS types in its native range. Of these native range ITS patterns, two have been introduced from Europe into North America and now occur widely across Canada and the U.S.A. Although the allotetraploid T. miscellus formed multiple times in western North America, only one of these ITS types was involved in the recurrent formations. These results for T. pratensis parallel our findings for T. dubius and further suggest that not all genotypes of these two species may be able to participate in the formation of allopolyploids. Our phylogenetic analyses reveal that several entities traditionally considered part of T. pratensis in the narrow sense are genetically distinct and mark unique lineages that may ultimately merit recognition as separate species. This proclivity for genetically distinct entities (potential cryptic species) within species recognized based on morphology appears common in Tragopogon . To unravel the complexities of what is referred to as “ T. pratensis ”, more intensive phylogenetic analyses involving many more samples from across the geographic range of the species are required, as are detailed assessments of taxonomy, morphology, and cytology.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.902
Threshold uncertainty score0.244

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.181
Teacher spread0.168 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations6
Published2023
Admission routes1
Has abstractyes

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