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Record W4378085747 · doi:10.5376/cmb.2022.12.0005

Identification and Expression Characteristic Analysis of CML Gene Family of Melon

2022· article· en· W4378085747 on OpenAlexvenueno aff
Lan Luo, Si Xiuyang, Lei Sun, Peng Gao, Li Yong Yong, Wang Xuezheng

Bibliographic record

VenueComputational Molecular Biology · 2022
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicAdvances in Cucurbitaceae Research
Canadian institutionsnot available
FundersNational Natural Science Foundation of China
KeywordsMelonGene familyBiologyGeneFusarium oxysporumJasmonic acidGeneticsGene expressionHorticulture

Abstract

fetched live from OpenAlex

Calmodulin-like ( CML ) is one of the important Ca 2+ sensors, which plays an important role in plant growth and development and stress response. In this study, melon ( Cucumismelo L.) genomic data was used to identify the melon CML protein family using bioinformatics methods, and its physical and chemical properties, location information, gene structure, phylogeny, and promoter were analyzed. The results showed that 60 CmCML protein genes were identified in the melon genomic data, containing 1~4 EF-hand domains, which were unevenly distributed on 12 chromosomes. By analyzing the evolutionary treewith Arabidopsis CMLs , CmCML could It is divided into 8 groups, and the number of various groups is different. It has certain similarities with other plant CML family genes in group classification. In the promoter analysis, abscisic acid, jasmonic acid, auxin, and gibberellin were identified. And drought, low temperature, mechanical damage and other signal response homeopathic elements. Real-time fluorescence quantitative results showed that gene expression of melon CML protein family was induced by the specialization of Fusarium oxysporum, these results predicted that the transcriptional regulation of melon CML protein family may participate in the resistance response of melon wilt, which is the gene family. The functional identification of each member laid a theoretical foundation.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.003

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.012
GPT teacher head0.330
Teacher spread0.319 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2022
Admission routes1
Has abstractyes

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