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Record W4378176766 · doi:10.1186/s12874-023-01944-2

Development of the global inflammatory bowel disease visualization of epidemiology studies in the 21st century (GIVES-21)

2023· article· en· W4378176766 on OpenAlexafffund
Joyce Wing Yan Mak, Yang Sun, Julajak Limsrivilai, Murdani Abdullah, Jamilya Kaibullayeva, Domingo Balderramo, Beatriz Iade Vergara, Mukesh S Paudel, Rupa Banerjee, Ida Hilmi, Raja Affendi Raja Ali, Ka Kei Ng, Mansour Altuwaijri, Paul Kelly, Jesús K. Yamamoto‐Furusho, Paulo Gustavo Kotze, Vineet Ahuja, Vui Heng Chong, Hang Viet Dao, Yvonne Abbey, Jessica Ching, Agnes Ho, Alicia K. W. Chan, Çharles N. Bernstein, Richard B. Gearry, María T. Abreu, David T. Rubin, Iris Dotan, Lindsay Hracs, Gilaad G. Kaplan, Siew C. Ng, Jiamei Rong, Xiaocui Chen, Huixian Song, Chan Zhou, Yanju Mu, Wenjuan Wei, Xinyu Bai, Satimai Aniwan, Taya Kitiyakara, Kamin Harinwan, Chalermrat Bunchorntavakul, Karjpong Techathuvanan, Phuripong Kijdamrongthum, Tanita Suttichaimongkol, Panu Wetwittayakhlang, Marcellus Simadibrata, Ari Fahrial Syam, Deka Larasati, Tjahjadi Robert Tedjasaputra, Arlyando Hezron Saragih, Hendra Koncoro, Aizhan Kanabayeva, Nazira Kongyrbayeva, Assem Kurmangaliyeva, Yelena Laryushina, Toktarova Perizat, Ayupova Venera, Kaliyakparova Aidana, Ignacio Toscani, Luciana Nicoloff, Marie Howe, Xin Hui Khoo, Wong Choon Heng, Harjinder Singh, Andrew Seng Boon Chua, Khong Wai Hong, Meng‐Tzu Weng, Wei‐Chen Lin, Hsi‐Chang Lee, Chun‐Chao Chang, Chun‐Chi Lin, Puo Hsien Le, Tien‐Yu Huang, Cheuk‐Kay Sun, Hsing‐Jung Yeh, Yu Hon Ho, Bashaar AlIbrahim, Phoebe Hodges, Bright Nsokolo, Yaw Asante Awuku, Michael Li, Kam Hon Chan, Yip Wai Man, Thomas Wong Yun-Sze, Alex Fong

Bibliographic record

VenueBMC Medical Research Methodology · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicInflammatory Bowel Disease
Canadian institutionsUniversity of CalgaryUniversity of Manitoba
FundersCanadian Institutes of Health ResearchLeona M. and Harry B. Helmsley Charitable Trust
KeywordsEpidemiologyMedicineInflammatory bowel diseaseIncidence (geometry)DiseasePopulationCrohn's diseaseUlcerative colitisCohort studyCohortEnvironmental healthDeveloped countryFamily medicineInternal medicine

Abstract

fetched live from OpenAlex

BACKGROUND: There is a rapid increase in the incidence of inflammatory bowel diseases (IBD) in newly industrialized countries, yet epidemiological data is incomplete. We herein report the methodology adopted to study the incidence of IBD in newly industrialized countries and to evaluate the effect of environmental factors including diet on IBD development. METHODS: Global IBD Visualization of Epidemiology Studies in the 21st Century (GIVES-21) is a population-based cohort of newly diagnosed persons with Crohn's disease and ulcerative colitis in Asia, Africa, and Latin America to be followed prospectively for 12 months. New cases were ascertained from multiple sources and were entered into a secured online system. Cases were confirmed using standard diagnostic criteria. In addition, endoscopy, pathology and pharmacy records from each local site were searched to ensure completeness of case capture. Validated environmental and dietary questionnaires were used to determine exposure in incident cases prior to diagnosis. RESULTS: Through November 2022, 106 hospitals from 24 regions (16 Asia; 6 Latin America; 2 Africa) have joined the GIVES-21 Consortium. To date, over 290 incident cases have been reported. All patients have demographic data, clinical disease characteristics, and disease course data including healthcare utilization, medication history and environmental and dietary exposures data collected. We have established a comprehensive platform and infrastructure required to examine disease incidence, risk factors and disease course of IBD in the real-world setting. CONCLUSIONS: The GIVES-21 consortium offers a unique opportunity to investigate the epidemiology of IBD and explores new clinical research questions on the association between environmental and dietary factors and IBD development in newly industrialized countries.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.037
metaresearch head score (Gemma)0.153
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.117
Threshold uncertainty score0.992

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0370.153
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.001
Science and technology studies0.0000.002
Scholarly communication0.0000.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.353
GPT teacher head0.532
Teacher spread0.179 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations38
Published2023
Admission routes2
Has abstractyes

Explore more

Same venueBMC Medical Research MethodologySame topicInflammatory Bowel DiseaseFrench-language works237,207