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Record W4378974775 · doi:10.1186/s13023-023-02707-4

Meeting abstracts from the 11th edition of the European conference on Rare Diseases & Orphan Products (ECRD) 2022

2023· article· en· W4378974775 on OpenAlexfundno aff

Bibliographic record

VenueOrphanet Journal of Rare Diseases · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenomics and Rare Diseases
Canadian institutionsnot available
FundersEuropean Rare Kidney Disease Reference NetworkUniversitätsklinikum HeidelbergRégion NormandieMedizinische Universität GrazKarl-Franzens-Universität GrazGIS-Institut des Maladies RaresRadboud UniversiteitLeids Universitair Medisch CentrumRadboud Universitair Medisch CentrumTrinity College DublinCERNHelsingin YliopistoEuropean CommissionInselspital, Universitätsspital BernF. Hoffmann-La RocheEuropean Organisation for Rare DiseasesOspedale Pediatrico Bambino GesùAlbert-Ludwigs-Universität FreiburgEuropean Federation of Pharmaceutical Industries and AssociationsUniversity of BernPTC TherapeuticsKU LeuvenAlexion PharmaceuticalsHospital for Sick ChildrenPfizer
KeywordsOrphan drugHuman geneticsMedicineBioinformaticsGeneticsBiology

Abstract

fetched live from OpenAlex

Background: The European Rare Disease Research Coordination and Support Action (ERICA) consortium aims at promoting and disseminating the adoption of standardized PROMs for rare diseases.The dedicated working team (the WP3 group) facilitates the creation of a PROMs repository for use in clinical practice, evaluation of care and clinical research.Material and methods: First, among the 4.000 questionnaires described in the Mapi Research Trust PROMs database, PROQOLID, we have selected PROMs developed and validated for rare diseasesand PROMs measuring specific functional impacts (such as mobility, self-care or communication).Second, we conducted a survey among European Reference Networks and patient organisations to collect additional PROMs of interest.Third, we developed coding rules for PROMs, based on the International Classification of Functioning, Disability and Health (ICF) code.The resulting ICF-coded PROMs had to match the ICF-coded functional impacts of rare diseases, generated by semi-structured interviews with the Orphanet Disability Questionnaire.Results: The search in PROQOLID identified 279 PROMs developed in rare diseases and 200 PROMs measuring functional impacts.The survey identified 31 additional PROMs.A preliminary coding was conducted on a convenient sample of 10 PROMs including generic (EQ-5D, SF-36), disease specific (Myasthenia Gravis-Quality of Life (MG-QOL) and Myasthenia Gravis-Activity of Daily Living (MG-ADL)) and function specific (Health Assessment Questionnaire (HAQ), National Eye Institute Visual Function Questionnaire -25 (NEI-VFQ-25)) PROMs. Conclusion:We have selected a first set of more than 500 PROMs eligible for inclusion in the repository.We have defined and tested PROMs coding rules, which will allow 600 rare diseases described through the Orphanet Disability Questionnaire to be matched with the relevant PROMs.The next steps are to implement the coding model to the full set of PROMs, to operationalize the repository platform for both researchers and clinicians and to routinely code new eligible PROMs.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.003
metaresearch head score (Gemma)0.008
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesInsufficient payload (model declined to judge)
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: Not applicable
GenreCandidate signal: Other · Consensus signal: Other
Teacher disagreement score0.447
Threshold uncertainty score0.789

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0030.008
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.001
Bibliometrics0.0030.002
Science and technology studies0.0010.001
Scholarly communication0.0040.002
Open science0.0020.003
Research integrity0.0020.002
Insufficient payload (model declined to judge)0.4470.263

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.016
GPT teacher head0.238
Teacher spread0.222 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

Study designNot applicable
Domainnot available
GenreOther

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2023
Admission routes1
Has abstractyes

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