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Record W4382281089 · doi:10.21203/rs.3.rs-3097836/v1

Streptococcus Pneumoniae-Associated Hemolytic Uremic Syndrome Canadian Immunization Monitoring Program ACTive National Pediatric Surveillance (1991-2019)

2023· preprint· en· W4382281089 on OpenAlexafffundabout
Lauren Dagyung Lee, Nirma Khatri Vadlamudi, Katherine Yu, Manish Sadarangani, Nicole Le Saux, Joanne Embreé, James D. Kellner, Shaun K. Morris, Scott A. Halperin, Julie A. Bettinger

Bibliographic record

VenueResearch Square · 2023
Typepreprint
Languageen
FieldMedicine
TopicPneumonia and Respiratory Infections
Canadian institutionsDalhousie UniversitySickKids FoundationUniversity of ManitobaChildren's Hospital of Eastern OntarioUniversity of Calgary
FundersIWK Health CentreHospital for Sick ChildrenMichael Smith Health Research BCBC Children's HospitalPublic Health Agency of CanadaChildren's Hospital FoundationPublic Health Agency
KeywordsMedicineStreptococcus pneumoniaeEpidemiologyPneumoniaPediatricsSerotypePneumococcal diseaseInternal medicineSurgeryImmunologyAntibioticsBiologyMicrobiology

Abstract

fetched live from OpenAlex

Abstract Background: Streptococcus pneumoniae-associated hemolytic uremic syndrome (SP-HUS) is an underreported cause of pediatric non-diarrheal HUS. This study describes the epidemiology of the largest Canadian case series of SP-HUS in comparison with non-HUS invasive pneumococcal disease (IPD). Methods: The Canadian Immunization Monitoring Program, ACTive (IMPACT) is a national surveillance network for vaccine-preventable diseases. All confirmed IPD cases between 1991-2019 were included in the analysis. IPD cases with new HUS diagnoses were identified as SP-HUS cases, and the rest as non-HUS IPD cases. Results: There were 30 (0.4%) cases of SP-HUS amongst 6,757 IPD cases. The median age of SP-HUS cases was 27.5 months, with no significant differences between SP-HUS and non-HUS cases in age or sex. S. pneumoniae serotypes 3 (30%) and 19A (26.7%) were more common in SP-HUS compared to non-HUS cases (P<0.0001). Pneumonia was more frequently observed in SP-HUS (67% vs. cases 26%; P<0.0001). All SP-HUS cases were hospitalized, compared with 71% non-HUS IPD cases (P=0.0004). SP-HUS cases had a longer median hospital length of stay (23.5 vs. 7 days; P<0.0001) and a higher proportion required ICU admission (70 vs 15.5%; P<0.0001). Moreover, ICU stays were longer in HUS cases compared with non-HUS cases (9 vs. 3 days; P<0.0001). All 30 SP-HUS patients survived while 3% of non-HUS cases died (P=0.33). Conclusion: SP-HUS was usually seen in IPD cases with pneumonia and was most commonly caused by serotypes 3 and 19A. Mortality was rare, but ICU care with lengthy hospital stay was common.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.002
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.031
Threshold uncertainty score0.108

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0010.002
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.003
Science and technology studies0.0010.000
Scholarly communication0.0010.000
Open science0.0010.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.086
GPT teacher head0.414
Teacher spread0.328 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes3
Has abstractyes

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