MétaCan
Menu
Back to cohort
Record W4382658132 · doi:10.1136/jnnp-2023-331490

Intronic<i>FGF14</i>GAA repeat expansions are a common cause of ataxia syndromes with neuropathy and bilateral vestibulopathy

2023· article· en· W4382658132 on OpenAlexafffund
David Pellerin, Carlo Wilke, Andreas Traschütz, Sara Nagy, Riccardo Curró, Marie‐Josée Dicaire, Héctor García‐Moreno, Mathieu Anheim, Thomas Wirth, Jennifer Faber, Dagmar Timmann, Christel Depienne, Dan Rujescu, José Gazulla, Mary M. Reilly, Paola Giunti, Bernard Brais, Henry Houlden, Lüdger Schöls, Michael Strupp, Andrea Cortese, Matthis Synofzik

Bibliographic record

VenueJournal of Neurology Neurosurgery & Psychiatry · 2023
Typearticle
Languageen
FieldNeuroscience
TopicGenetic Neurodegenerative Diseases
Canadian institutionsCentre de réadaptation Lethbridge-Layton-MackayMcGill UniversityMontreal Neurological Institute and Hospital
FundersFondation Groupe MonacoCanadian Institutes of Health ResearchFondazione Regionale per la Ricerca BiomedicaServierRegione LombardiaMedizinische Universität WienFondazione CariploMedical Research CouncilUniversität WienNational Institute for Health and Care ResearchBundesministerium für Bildung und ForschungDeutsche ForschungsgemeinschaftUniversity College London Hospitals NHS Foundation TrustRosetrees TrustElse Kröner-Fresenius-StiftungNIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer ResearchUniversity College LondonFondation de l'Hôpital Général de MontréalWellcome Trust
KeywordsAtaxiaMedicinePsychiatry

Abstract

fetched live from OpenAlex

Background Intronic GAA repeat expansions in the fibroblast growth factor 14 gene (FGF14) have recently been identified as a common cause of ataxia with potential phenotypic overlap withRFC1-related cerebellar ataxia, neuropathy and vestibular areflexia syndrome (CANVAS). Our objective was to report on the frequency of intronicFGF14GAA repeat expansions in patients with an unexplained CANVAS-like phenotype. Methods We recruited 45 patients negative for biallelicRFC1repeat expansions with a combination of cerebellar ataxia plus peripheral neuropathy and/or bilateral vestibulopathy (BVP), and genotyped theFGF14repeat locus. Phenotypic features of GAA-FGF14-positive versus GAA-FGF14-negative patients were compared. Results Frequency ofFGF14GAA repeat expansions was 38% (17/45) in the entire cohort, 38% (5/13) in the subgroup with cerebellar ataxia plus polyneuropathy, 43% (9/21) in the subgroup with cerebellar ataxia plus BVP and 27% (3/11) in patients with all three features. BVP was observed in 75% (12/16) of GAA-FGF14-positive patients. Polyneuropathy was at most mild and of mixed sensorimotor type in six of eight GAA-FGF14-positive patients. Family history of ataxia (59% vs 15%; p=0.007) was significantly more frequent and permanent cerebellar dysarthria (12% vs 54%; p=0.009) significantly less frequent in GAA-FGF14-positive than in GAA-FGF14-negative patients. Age at onset was inversely correlated to the size of the repeat expansion (Pearson’s r, −0.67; R2=0.45; p=0.0031). Conclusions GAA-FGF14-related disease is a common cause of cerebellar ataxia with polyneuropathy and/or BVP, and should be included in the differential diagnosis ofRFC1CANVAS and disease spectrum.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.007

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0020.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.026
GPT teacher head0.262
Teacher spread0.236 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations45
Published2023
Admission routes2
Has abstractyes

Explore more

Same venueJournal of Neurology Neurosurgery & PsychiatrySame topicGenetic Neurodegenerative DiseasesFrench-language works237,207