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Record W4383823144 · doi:10.1016/j.radonc.2023.109803

Recommendations for improved reproducibility of ADC derivation on behalf of the Elekta MRI-linac consortium image analysis working group

2023· article· en· W4383823144 on OpenAlexafffund
Anne Louise Højmark Bisgaard, Rick Keesman, Astrid L.H.M.W. van Lier, Catherine Coolens, Petra J. van Houdt, Alison Tree, Andreas Wetscherek, Paul B. Romesser, Neelam Tyagi, Monica Lo Russo, Jonas Habrich, Danny Vesprini, Angus Lau, Stella Mook, Peter Chung, Linda G.W. Kerkmeijer, Zeno A.R. Gouw, Ebbe Laugaard Lorenzen, Uulke A. van der Heide, Tine Schytte, Carsten Brink, Faisal Mahmood

Bibliographic record

VenueRadiotherapy and Oncology · 2023
Typearticle
Languageen
FieldMedicine
TopicMRI in cancer diagnosis
Canadian institutionsUniversity of TorontoSunnybrook Health Science CentrePrincess Margaret Cancer CentreUniversity Health Network
FundersNational Cancer InstituteCancer Research UKSunnybrook Research Institute
KeywordsReproducibilityMedical physicsLinear particle acceleratorNuclear medicineMedicinePhysicsMathematicsOpticsStatisticsBeam (structure)

Abstract

fetched live from OpenAlex

Background and purpose The apparent diffusion coefficient (ADC), a potential imaging biomarker for radiotherapy response, needs to be reproducible before translation into clinical use. The aim of this study was to evaluate the multi-centre delineation- and calculation-related ADC variation and give recommendations to minimize it. Materials and methods Nine centres received identical diffusion-weighted and anatomical magnetic resonance images of different cancerous tumours (adrenal gland, pelvic oligo metastasis, pancreas, and prostate). All centres delineated the gross tumour volume (GTV), clinical target volume (CTV), and viable tumour volume (VTV), and calculated ADCs using both their local calculation methods and each of the following calculation conditions: b-values 0–500 vs. 150–500 s/mm 2 , region-of-interest (ROI)-based vs. voxel-based calculation, and mean vs. median. ADC variation was assessed using the mean coefficient of variation across delineations (CV D ) and calculation methods (CV C ). Absolute ADC differences between calculation conditions were evaluated using Friedman's test. Recommendations for ADC calculation were formulated based on observations and discussions within the Elekta MRI-linac consortium image analysis working group. Results The median (range) CV D and CV C were 0.06 (0.02–0.32) and 0.17 (0.08–0.26), respectively. The ADC estimates differed 18% between b-value sets and 4% between ROI/voxel-based calculation (p-values < 0.01). No significant difference was observed between mean and median (p = 0.64). Aligning calculation conditions between centres reduced CV C to 0.04 (0.01–0.16). CV D was comparable between ROI types. Conclusion Overall, calculation methods had a larger impact on ADC reproducibility compared to delineation. Based on the results, significant sources of variation were identified, which should be considered when initiating new studies, in particular multi-centre investigations.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.247
metaresearch head score (Gemma)0.472
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesMetaresearch
Consensus categoriesMetaresearch
DomainCandidate signal: Reproducibility · Consensus signal: none
Study designCandidate signal: Not applicable · Consensus signal: none
GenreCandidate signal: Methods · Consensus signal: Methods
Teacher disagreement score0.753
Threshold uncertainty score0.929

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.2470.472
Meta-epidemiology (narrow)0.0030.003
Meta-epidemiology (broad)0.0020.003
Bibliometrics0.0100.006
Science and technology studies0.0030.004
Scholarly communication0.0090.006
Open science0.0110.005
Research integrity0.0070.007
Insufficient payload (model declined to judge)0.0100.015

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.057
GPT teacher head0.375
Teacher spread0.317 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; the direct Gemma label and the distilled Codex classifier agree on what is shown here.

Study designNot applicable
DomainReproducibility
GenreMethods

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations19
Published2023
Admission routes2
Has abstractyes

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