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Record W4384695873 · doi:10.22215/etd/2023-15503

The Metabolism of 6:2 FTOH and its Role in Covalent Protein Modifications

2023· dissertation· en· W4384695873 on OpenAlexaff
Risha Devi Minocha-Mckenney

Bibliographic record

Venuenot available
Typedissertation
Languageen
FieldEnvironmental Science
TopicPer- and polyfluoroalkyl substances research
Canadian institutionsCarleton University
Fundersnot available
KeywordsMicrosomeChemistryCovalent bondHuman liverEnzymeMetabolismBiochemistryKineticsStereochemistryChromatographyOrganic chemistry

Abstract

fetched live from OpenAlex

Fluorotelomer alcohols (FTOHs) belong to a group of chemicals called per-and polyfluoroalkyl substances (PFAS).PFAS have been shown to cause toxicity in humans through exposure to household products, ingestion of dust, water, or inhalation of indoor air.Some studies have postulated the mechanism of action for FTOH metabolism, which is that certain metabolites can cause toxicity, such as hormonal discrepancies, immunotoxicity, and possible tumor aggregation.Two understudied groups of bioactive metabolites of FTOHs are the fluorotelomer saturated and unsaturated aldehydes (FTAL and FTUAL).As shown in Figure 1, these are reactive metabolites, due to their highly electrophilic α,β-unsaturated or saturated aldehyde moieties that will react with biological nucleophiles to potentially cause protein modification or inactivation.Yet, the proteins they covalently bind to are unknown.Determining specific proteins will demonstrate how biological mechanisms are affected in the presence of these metabolites.Some issues could include disruption of cellular events or cell signalling leading to toxicity.Therefore, this project focused on the specific proteins modified upon FTOH biotransformation.Our hypothesis was that 6:2 FTAL and/or 6:2 FTUAL would react immediately with the enzyme(s) that produce it, given their high reactivity.Enzymes of interest were cytochrome P450 (CYP) 2A6 and 2E1, which were determined as possible targets from previous studies as they were shown to be active for the metabolism of FTOHs.We also used CYP 3A4 as a negative control.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.003
Threshold uncertainty score0.009

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0030.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.022
GPT teacher head0.298
Teacher spread0.276 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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