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Record W4384696112 · doi:10.1101/2023.07.16.549226

Systematics of harvester ants ( <i>Messor</i> ) in Israel based on integrated morphological, genetic, and ecological data

2023· preprint· en· W4384696112 on OpenAlexfundno aff
Maya Saar, Pierre‐André Eyer, Tali Magory Cohen, Armin Ionescu-Hirsch, Roi Dor, Netta Dorchin

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2023
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicInsect and Arachnid Ecology and Behavior
Canadian institutionsnot available
FundersAlberta Innovates - Health Solutions
KeywordsBiologyEcologyEcological nichePhylogenetic treeEnvironmental niche modellingSubspeciesHabitatSystematicsCladeNicheEcosystem diversityTaxonomy (biology)Evolutionary biologyEcosystemGene

Abstract

fetched live from OpenAlex

ABSTRACT Harvester ants of the genus Messor are considered ecosystem engineers, whose distribution is broadly influenced by a variety of environmental factors. Although distinct Messor species have been reported to inhabit different habitats, their taxonomy in Israel remains largely ambiguous, hampering the proper ecological characterization of these species. Here, we applied an integrative species delimitation approach combining morphology-based identification, phylogenetic analyses of nuclear and mitochondrial genes, and ecological niche modelling to investigate the phylogenetic relationships among Messor species in the small but ecologically diverse region of Israel. Our analyses of mitochondrial genes revealed the presence of at least 13 well-defined lineages, whereas only seven were supported by the analysis of the nuclear genes. However, the concatenated tree that included all the three markers supported 11 lineages. Among two of the lineages-in M. semirufus and in a group of ants closest in resemblance to M. grandinidus- we identified 3-4 clades that were well established on most trees, inviting further study. In addition, we reveal three undescribed species and raise two subspecies to species rank, highlighting the high diversity of harvester ants in Israel. Ecological niche modelling consistently supported the observed distribution of species, with soil type and average annual temperature being the most influential factors. These results demonstrate that species distribution modelling can serve as a valuable component of integrative species delimitation. We call for future studies to investigate these fascinating lineages of one of the most prominent and ecologically important genera of ants in the Mediterranean Basin.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0020.001
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.037
GPT teacher head0.257
Teacher spread0.220 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2023
Admission routes1
Has abstractyes

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