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Record W4385423647 · doi:10.1017/s0031182023000690

Comparison of Kato–Katz, PCR and coproantigen for the diagnosis of <i>Taenia solium</i> taeniasis

2023· article· en· W4385423647 on OpenAlexfundno aff
Marshall W. Lightowlers, Diana Edithe Andria Mananjara, Mihajamanana Rakotoarinoro, Valisoa Claude Rakotoarison, Modéstine Raliniaina, Harentsoaniaina Rasamoelina-Andriamanivo, Charles G. Gauci, Abdul Jabbar, Kabemba E. Mwape, Meritxell Donadeu, Noromanana Sylvia Ramiandrasoa, José Alphonse Nely

Bibliographic record

VenueParasitology · 2023
Typearticle
Languageen
FieldMedicine
TopicParasitic infections in humans and animals
Canadian institutionsnot available
FundersInternational Development Research CentreGlobal Affairs CanadaBill and Melinda Gates Foundation
KeywordsTaenia soliumBiologyAmpliconTaeniasisPolymerase chain reactionFecesNested polymerase chain reactionTaeniaVeterinary medicineVirologyCysticercosisMicrobiologyHelminthsGeneGeneticsImmunologyCestode infectionsZoologyMedicine

Abstract

fetched live from OpenAlex

Abstract Four methods were compared for the diagnosis of human taeniasis caused by Taenia solium. Fecal samples from persons living in a T. solium endemic region of Madagascar were examined for taeniid eggs by the Kato–Katz method. Subsequently, samples positive ( n = 16) and negative ( n = 200) for T. solium eggs were examined by (i) amplification of the fragment of small subunit of the mitochondrial ribosomal RNA ( rrn S) gene using conventional polymerase chain reaction (PCR) and (ii) a nested PCR of a fragment of the T. solium Tso31 gene. Additionally, 12 egg-positive and all egg-negative samples were tested for coproantigen detection. A further 9 egg-positive fecal samples were examined using both PCRs. Of the 12 egg-positive samples tested by PCRs and coproantigen methods, 9 (75%) were positive by rrn S PCR, 3 (25%) using Tso31 -nested PCR and 9 (75%) by coproantigen testing. None of the 200 egg-negative fecal samples was positive in either rrn S or Tso31 -nested PCR. Twenty of the 25 egg-positive samples (80%) were positive in rrn S PCR, and DNA sequencing of PCR amplicons was obtained from 18 samples, all confirmed to be T. solium . Twelve of the 25 egg-positive samples (48%) were positive in the Tso31 -nested PCR, all of which were also positive by rrn S PCR. It is suggested that species-specific diagnosis of T. solium taeniasis may be achieved by either coprological examination to detect eggs or coproantigen testing, followed by rrn S PCR and DNA sequencing to confirm the tapeworm species in egg-positive or coproantigen-positive samples.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.079
Threshold uncertainty score0.332

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.087
GPT teacher head0.438
Teacher spread0.350 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations4
Published2023
Admission routes1
Has abstractyes

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