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Record W4385611863 · doi:10.1101/2023.08.03.551855

Comparative study of thermal tolerance and other physiological characteristics in <i>C. briggsae</i> and <i>C. elegans</i>

2023· preprint· en· W4385611863 on OpenAlexaff
Nikita Jhaveri, Harvir Bhullar, Bhagwati P. Gupta

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2023
Typepreprint
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetics, Aging, and Longevity in Model Organisms
Canadian institutionsMcMaster University
Fundersnot available
KeywordsBiologyCaenorhabditisNematodeCaenorhabditis elegansStrain (injury)GeneticsGeneEcologyAnatomy

Abstract

fetched live from OpenAlex

ABSTRACT The nematode Caenorhabditis briggsae ( C. briggsae ) is routinely used in genetic and evolutionary studies involving its well-known cousin, C. elegans . The two species are morphologically almost identical but exhibit significant developmental, genetic, and genomic differences. The AF16 isolate of C. briggsae is an established reference strain. We used additional wild isolates from tropical and temperate regions to perform a comparative study of phenotypic characters. The analysis revealed both intra (between C. briggsae isolates) and inter (compared to C. elegans N2) species variability in dimensions and opacity. Our data also showed that C. briggsae isolates prefer higher temperatures for growth, reproduction, and survival than C. elegans N2. The preference for higher temperatures further translated into a higher tolerance for heat stress, as evidenced by its survival at temperatures lethal to N2. Interestingly, we found that while C. briggsae is more resistant to heat and shows greater sensitivity to other forms of stress, namely oxidative and osmotic, compared to C. elegans . The heat resistance of C. briggsae was correlated with efficient upregulation of the cytosolic chaperon hsp-16.2 . Overall, this work has revealed significant differences in stress sensitivities between the two nematodes and forms the basis to investigate changes in underlying mechanisms that affect their stress responses.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: none
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.002
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.025
GPT teacher head0.244
Teacher spread0.220 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations1
Published2023
Admission routes1
Has abstractyes

Explore more

Same venuebioRxiv (Cold Spring Harbor Laboratory)→Same topicGenetics, Aging, and Longevity in Model Organisms→French-language works237,207→