MétaCan
Menu
Back to cohort

A novel population of CD103-expressing CD56+ regulatory ILCs suppresses intratumoural T cells and are associated with poor prognosis in patients with ovarian carcinoma

2023· article· en· W4385686544 on OpenAlexaffabout
Douglas C. Chung, Jehan Vakharia, Kathrin Warner, Nicolas Jacquelot, Azin Sayad, SeongJun Han, Maryam Ghaedi, Carlos R. Garcia-Batres, Alisha R. Elford, Jessica A. Matthews, Ben X. Wang, Linh T. Nguyen, Patricia A. Shaw, Blaise Clarke, Marcus Q. Bernardini, Sarah E. Ferguson, Sarah Q. Crome, Pamela S. Ohashi

Bibliographic record

VenueThe Journal of Immunology · 2023
Typearticle
Languageen
FieldImmunology and Microbiology
TopicIL-33, ST2, and ILC Pathways
Canadian institutionsUniversity Health NetworkToronto General HospitalPrincess Margaret Cancer CentreUniversity of Toronto
Fundersnot available
KeywordsBiologyTIGITCD8Tumor microenvironmentCytotoxic T cellPopulationCancer researchImmunologyOvarian cancerImmune systemIn vitroCancerMedicineGenetics

Abstract

fetched live from OpenAlex

Abstract Regulatory innate lymphoid cells (ILCregs) are an emerging family of immunoregulatory cells that suppress innate and adaptive immunity in the context of diseases, including cancer. However, there is currently a lack of lineage-defining surface markers or transcription factors (TFs) that distinguishes ILCregs from other subsets of ILCs. Moreover, the functional role of ILCregs within the tumour microenvironment (TME) has not been well established. In this study, we uncovered a novel population of CD103-expressing CD56+ ILCregs within the TME that correlated with poor recurrent-free survival (RFS) in patients with epithelial ovarian carcinoma (EOC). CD103+ ILCregs expressed distinct surface markers and TFs that distinguishes them from canonical CD56+ natural killer (NK) cells. Moreover, intratumoural CD103+ ILCregs expressed markers (i.e., CD39, CD69, CD101, TIGIT) and transcriptomic profiles that are shared with Tregs, suggesting that they may have immunoregulatory properties. We found that ascites-derived TGF-β drives NK cell conversion into CD103+ ILCs that can suppress autologous CD4+ T cells in vitro. Furthermore, intratumoural CD103+ ILCregs suppressed autologous CD8+ T cells in vitro. Finally, we found that the abundance of CD103+ ILCregs in the TME were associated with reduced levels of both activated CD4+ T cells and CD8+ T cells. Overall, we have identified CD103+ ILCregs as distinct immunoregulatory cells that suppresses T cells within the TME of patients with EOC. Further untangling of the complex networks of immune regulation, including ILCregs, may give rise to novel therapeutic targets to enhance anti-tumour immunity and improve clinical response rates to immunotherapies. This work was supported by a CIHR foundation award (CIHR FDN #143220), a TRANSCAN CIHR grant (CIHR – TRN #184713), a TRI grant from the Ontario Institute for Cancer Research (TRI OICR GCS #108796), and the Terry Fox Research Institute (TFRI-iTNT #1060). This project was also generously funded in memory of Mr. JIM JoTak under the Canadian Cancer Society (CCSRI #706152).

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.350
Threshold uncertainty score0.456

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.010
GPT teacher head0.189
Teacher spread0.179 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one teacher head, not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes2
Has abstractyes

Explore more

Same venueThe Journal of ImmunologySame topicIL-33, ST2, and ILC PathwaysFrench-language works237,207