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P422: TARGETING THE WT1MUT-MIR-193A TRANSCRIPTIONAL AXIS WITH INT-1B3, A NOVEL LIPID NANOPARTICLE-FORMULATED MIR-193A-3P MIMIC IN ACUTE MYELOID LEUKEMIA

2023· article· en· W4385739932 on OpenAlexaff
Xining Yang, Kathrin Krowiorz, Daelynn R. Buelow, R Bhayadia, Jessica Kohlschmidt, Deedra Nicolet, Tobias Maetzig, Caroline Pabst, Jeremy Man Ho Hui, Arshia Shad, Sharon Gao, Maria Stephenson, Si Wei Wu, Marion T.J. van den Bosch, Leo Escano, Frances E. Lock, Afsaneh Panahi, Liam MacPhee, Irina A. Maksakova, Amanda Amoah, Konstanze Döhner, Linda Fogelstrand, Ann‐Kathrin Eisfeld, Sanaz Yahyanejad, Michel Janicot, Jan‐Henning Klusmann, Sharyn D. Baker, Christopher C. Oakes, A. MAUREEN ROUHI, Florian Kuchenbauer

Bibliographic record

VenueHemaSphere · 2023
Typearticle
Languageen
FieldMedicine
TopicAcute Myeloid Leukemia Research
Canadian institutionsTerry Fox Research Institute
Fundersnot available
KeywordsCancer researchMyeloid leukemiaDNA methylationEpigeneticsmicroRNADecitabineBiologyMethylationGene silencingLeukemiaGeneImmunologyGene expressionGenetics

Abstract

fetched live from OpenAlex

Background: Wilms Tumor 1 mutations (WT1mut) is a negative prognostic factor in acute myeloid leukemia patients with normal karyotype (CN-AML) with no tailored treatment. Considering that AML patients with WT1mut are characterized by a DNA hypermethylation signature, we hypothesized that epigenetic silencing of downstream genes supports the growth of WT1mut AML cells and could represent therapeutic drug targets. Aims: Here, we explore the tumor suppressor potential of miR-193a in CN-AML. We aim to uncover its full target range, both 5p and 3p arms, with a goal of utilizing it as an effective therapeutic for AML cells through a lipid nanoparticle formulation. Methods: We took advantage of a primary murine AML transplantation model based on the combined overexpression of Hoxa9 and Meis1 (H9M), which are frequently upregulated in CN-AML, human AML cell lines and primary AML samples. Results: Analysis of publicly available methylation and miRNA expression data suggested transcriptional repression by increased DNA methylation at the miR-193a locus in WT1mut AML cells. MiR-193a is located within a large CpG island and has been previously implicated as a tumor suppressor in AML patients, however, its regulation and impact in CN-AML is unknown. MiRNA-Seq data of 300 CN-AML patients subsequently confirmed repression of miR-193a transcript levels in patients with WT1mut. Moreover, lentiviral overexpression of WT1mut in human AML cell lines conferred low miR-193a levels, whereas overexpression of WT1wt increased miR-193a even in the presence of endogenous WT1mut, highlighting the role of WT1wt as a transcriptional activator of miR-193a in AML cells. Enforced expression of miR-193a significantly delayed AML onset in vivo. In addition, overexpression of miR-193a in multiple human AML cell lines and primary patient samples impaired AML cell growth and colony-forming capacity while promoting monocytic differentiation, underscoring its role as potent tumor suppressor. To define the target range of each arm, we performed RNA-Seq in human AML cells transfected with miR-193a-3p or 5p mimics. Subsequent gene set enrichment analysis suggested that miR-193a, in particular miR-193a-3p modulates the MAPK pathway and exogenous interactions between AML cells and the immune system. Therapeutic modulation of miRNA levels in cancer patients has been an attractive concept due to their ability to impact on multiple pathways, but technical limitations in their delivery and tissue enrichment have prevented translation from the preclinical stage to patients. To overcome this, we tested a novel lipid-nanoparticle (LNP) formulation of miR-193a-3p (INT-1B3), which is currently being investigated in a phase I clinical trial for solid tumor patients (NCT04675996). To evaluate the effect of INT-1B3 on leukemogenesis in vivo, we engrafted H9M cells in a murine host with an intact immune system, allowing INT-1B3 to exert its immunomodulatory effects. Biweekly i.v. treatments of INT-1B3 after H9M cell transplantation prevented AML formation, highlighting the potent anti-leukemic activity of this miRNA based therapeutic. Summary/Conclusion: We uncover a previously unknown regulatory mechanism between WT1mut and miR-193a in AML cells, which provides a novel therapeutic target for a miR-193a based therapeutic for AML patients. Keywords: WT1, Immunomodulation, Acute myeloid leukemia, Nanoparticle

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.001
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesMeta-epidemiology (narrow), Insufficient payload (model declined to judge)
Consensus categoriesInsufficient payload (model declined to judge)
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.671
Threshold uncertainty score1.000

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0010.000
Meta-epidemiology (narrow)0.0010.000
Meta-epidemiology (broad)0.0010.000
Bibliometrics0.0000.003
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0010.000
Research integrity0.0000.002
Insufficient payload (model declined to judge)0.0010.001

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.024
GPT teacher head0.276
Teacher spread0.252 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; both teacher heads agree on what is shown here.

Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations0
Published2023
Admission routes1
Has abstractyes

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