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Record W4386018701 · doi:10.1016/j.foreco.2023.121370

Signs of rapid evolution in an invasive forest species: Drivers of the incipient neutral, adaptive and phenotypic divergence

2023· article· en· W4386018701 on OpenAlexaff
Ramiro R. Ripa, Julissa Roncal, Yan B. Linhart, Jorgelina Franzese, Estela Raffaele, Andrea C. Premoli

Bibliographic record

VenueForest Ecology and Management · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetic diversity and population structure
Canadian institutionsMemorial University of Newfoundland
Fundersnot available
KeywordsBiologyRange (aeronautics)Genetic diversityGenetic driftInbreeding depressionPinus radiataInvasive speciesEcologyGenetic divergenceSelection (genetic algorithm)Evolutionary biologyPopulationInbreedingGenetic variationGeneticsGene

Abstract

fetched live from OpenAlex

Evolutionary forces such as genetic drift and natural selection operate during the process of biological invasion. More specifically, nonnative populations suffer genetic and demographic bottlenecks, and are exposed to new environmental, climatic and biotic filters. Thus, neutral and/or adaptive drivers may contribute to genetic differentiation of the introduced germplasm. We hypothesize that the gene pool of fire-adapted species that become invasive in fire-prone ecosystems may differ from that of originally planted and native one because of novel selective forces and founder effects. Genetic impoverishment due to genetic drift could also be buffered by demographic processes as the production of a large aerial seed bank by serotiny. We conducted genomic analyses of the world’s most planted tree Pinus radiata using Single Nucleotide Polymorphisms, comparing introduced cohorts with and without fire exposure, and also with one population of the native range. Phenotypic traits of introduced cohorts were assessed for quantitative characters. In the introduced range we found lower expected heterozygosity and nucleotide diversity due to bottlenecks during introduction and commercial selection in orchards. We also detected decreased inbreeding, related to a serotinous seed bank that buffers bottlenecks. We found genomic regions under selection, both in the comparison between native and introduced range, and between introduced cohorts with and without exposure to fire. Within the introduced area, we observed possible fire-mediated diversifying selection for five quantitative traits. Our results show that both neutral and adaptive forces promote early divergence of the introduced species Pinus radiata . Also, fire acts as a rapid selection factor, prompting the incipient adaptive divergence of cohorts recruited after fires, facilitating invasion.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.001
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.001
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0010.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.014
GPT teacher head0.213
Teacher spread0.198 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations3
Published2023
Admission routes1
Has abstractyes

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