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Record W4386245000 · doi:10.1101/2023.08.28.554882

Characterizing Subcortical Structural Heterogeneity in Autism

2023· preprint· en· W4386245000 on OpenAlexafffund
David N. MacDonald, Saashi A. Bedford, Emily Olafson, Min Tae M Park, Gabriel A. Devenyi, Stéphanie Tullo, Raihaan Patel, Evdokia Anagnostou, Simon Baron‐Cohen, Edward T. Bullmore, Lindsay R. Chura, Michael Craig, Christine Ecker, Dorothea L. Floris, Rosemary Holt, Rhoshel Lenroot, Jason P. Lerch, Michael Lombardo, Declan Murphy, Armin Raznahan, Amber Ruigrok, Elizabeth Smith, Russell T. Shinohara, Michael D. Spencer, John Suckling, Margot J. Taylor, Audrey Thurm, Meng‐Chuan Lai, M. Mallar Chakravarty

Bibliographic record

VenuebioRxiv (Cold Spring Harbor Laboratory) · 2023
Typepreprint
Languageen
FieldNeuroscience
TopicAutism Spectrum Disorder Research
Canadian institutionsCentre for Addiction and Mental HealthHospital for Sick ChildrenHolland Bloorview Kids Rehabilitation HospitalSickKids FoundationUniversity of TorontoMcGill UniversityDouglas Mental Health University Institute
FundersNational Institute of Mental HealthMedical Research CouncilNational Institutes of HealthKing's College LondonCanadian Institutes of Health ResearchNational Institute for Health and Care ResearchCanada First Research Excellence FundGovernment of OntarioSouth London and Maudsley NHS Foundation TrustMcGill University
KeywordsGlobus pallidusThalamusStriatumAutismNeurosciencePsychologyNeuroimagingVentral striatumAutism spectrum disorderBiologyBasal gangliaDopamineCentral nervous systemDevelopmental psychology

Abstract

fetched live from OpenAlex

Abstract Autism presents with significant phenotypic and neuroanatomical heterogeneity, and neuroimaging studies of the thalamus, globus pallidus and striatum in autism have produced inconsistent and contradictory results. These structures are critical mediators of functions known to be atypical in autism, including sensory gating and motor function. We examined both volumetric and fine-grained localized shape differences in autism using a large ( n =3145, 1045-1318 after strict quality control), cross-sectional dataset of T1-weighted structural MRI scans from 32 sites, including both males and females (assigned-at-birth). We investigated three potentially important sources of neuroanatomical heterogeneity: sex, age, and intelligence quotient (IQ), using a meta-analytic technique after strict quality control to minimize non-biological sources of variation. We observed no volumetric differences in the thalamus, globus pallidus, or striatum in autism. Rather, we identified a variety of localized shape differences in all three structures. Including age, but not sex or IQ, in the statistical model improved the fit for both the pallidum and striatum, but not for the thalamus. Age-centered shape analysis indicated a variety of age-dependent regional differences. Overall, our findings help confirm that the neurodevelopment of the striatum, globus pallidus and thalamus are atypical in autism, in a subtle location-dependent manner that is not reflected in overall structure volumes, and that is highly non-uniform across the lifespan.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.005
metaresearch head score (Gemma)0.008
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.005
Threshold uncertainty score0.026

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0050.008
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0010.002
Bibliometrics0.0030.002
Science and technology studies0.0000.001
Scholarly communication0.0010.000
Open science0.0010.001
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.047
GPT teacher head0.289
Teacher spread0.243 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designObservational
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

Quick stats

Citations2
Published2023
Admission routes2
Has abstractyes

Explore more

Same venuebioRxiv (Cold Spring Harbor Laboratory)→Same topicAutism Spectrum Disorder Research→French-language works237,207→