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Beyond the Global Brain Differences: Intraindividual Variability Differences in 1q21.1 Distal and 15q11.2 BP1-BP2 Deletion Carriers

2023· article· en· W4386400773 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueBiological Psychiatry · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenomic variations and chromosomal abnormalities
Canadian institutionsHospital for Sick ChildrenUniversity of TorontoUniversité de MontréalCentre Hospitalier Universitaire Sainte-Justine
FundersEunice Kennedy Shriver National Institute of Child Health and Human DevelopmentNational Institute on AgingNational Institute of Mental HealthHelse Sør-Øst RHFInstituto de Salud Carlos IIIHorizon 2020Sixth Framework ProgrammeSeventh Framework ProgrammeHorizon 2020 Framework ProgrammeMinistry of Cultural AffairsNational Institute of Biomedical Imaging and BioengineeringAmsterdam NeuroscienceFundación Marqués de ValdecillaHeinz Nixdorf StiftungRamsay Health CareNational Health and Medical Research CouncilNeuraxpharmH. Lundbeck A/SNorges IdrettshøgskoleMedical Research CouncilEpilepsy SocietyServierSiemens HealthineersMission Interministérielle de Lutte Contre les Drogues et les Conduites AddictivesFédération pour la Recherche sur le CerveauAustralian Schizophrenia Research BankMinistero dell’Istruzione, dell’Università e della RicercaNorges ForskningsrådFondation de l'Avenir pour la Recherche Médicale AppliquéeUniversitetet i OsloNIHR Biomedical Research Centre, Royal Marsden NHS Foundation Trust/Institute of Cancer ResearchSanofiFondation de FranceNational Institute of Diabetes and Digestive and Kidney DiseasesKing’s College LondonKnut och Alice Wallenbergs StiftelseDeutsche ForschungsgemeinschaftNederlandse Organisatie voor Wetenschappelijk OnderzoekNational Institute on Drug AbuseSouth London and Maudsley NHS Foundation TrustFondation pour la Recherche MédicaleBundesministerium für Bildung und ForschungNational Institute of Child Health and Human DevelopmentHersenstichtingRadboud UniversiteitMinistero della SaluteAssistance Publique - Hôpitaux de ParisInstitut National de la Santé et de la Recherche MédicaleUniversität GreifswaldVistagen TherapeuticsBiogenAgence Nationale de la RechercheEuropean CommissionEuropean Research CouncilKing's College LondonPratt FoundationNational Institute for Health and Care ResearchCilagForschungszentrum JülichPfizerEU Joint Programme – Neurodegenerative Disease ResearchMedical Research FoundationMax Planck Instituut voor PsycholinguïstiekWellcome TrustZonMwNational Center for Research ResourcesNational Alliance for Research on Schizophrenia and DepressionSunovionJapan Society for the Promotion of ScienceAvera Institute for Human GeneticsAstellas PharmaEisaiInternational Seafood Sustainability FoundationU.S. Department of EnergyAustralian Research CouncilFresenius Medical Care North AmericaCentre for Medical Systems BiologyNovo NordiskSylvia and Charles Viertel Charitable FoundationWaterloo FoundationScience Foundation IrelandNational Institutes of HealthStiftelsen Kristian Gerhard JebsenBaily Thomas Charitable FundEuropean Science FoundationUniversité Paris-SudJapan Agency for Medical Research and DevelopmentBrain and Behavior Research Foundation
KeywordsPsychology

Abstract

fetched live from OpenAlex

BACKGROUND: Carriers of the 1q21.1 distal and 15q11.2 BP1-BP2 copy number variants exhibit regional and global brain differences compared with noncarriers. However, interpreting regional differences is challenging if a global difference drives the regional brain differences. Intraindividual variability measures can be used to test for regional differences beyond global differences in brain structure. METHODS: Magnetic resonance imaging data were used to obtain regional brain values for 1q21.1 distal deletion (n = 30) and duplication (n = 27) and 15q11.2 BP1-BP2 deletion (n = 170) and duplication (n = 243) carriers and matched noncarriers (n = 2350). Regional intra-deviation scores, i.e., the standardized difference between an individual's regional difference and global difference, were used to test for regional differences that diverge from the global difference. RESULTS: For the 1q21.1 distal deletion carriers, cortical surface area for regions in the medial visual cortex, posterior cingulate, and temporal pole differed less and regions in the prefrontal and superior temporal cortex differed more than the global difference in cortical surface area. For the 15q11.2 BP1-BP2 deletion carriers, cortical thickness in regions in the medial visual cortex, auditory cortex, and temporal pole differed less and the prefrontal and somatosensory cortex differed more than the global difference in cortical thickness. CONCLUSIONS: We find evidence for regional effects beyond differences in global brain measures in 1q21.1 distal and 15q11.2 BP1-BP2 copy number variants. The results provide new insight into brain profiling of the 1q21.1 distal and 15q11.2 BP1-BP2 copy number variants, with the potential to increase understanding of the mechanisms involved in altered neurodevelopment.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.018
Threshold uncertainty score0.469

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.017
GPT teacher head0.240
Teacher spread0.223 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it