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Record W4386422263 · doi:10.1515/bot-2023-0031

An overview of fungal taxonomic, functional, and genetic diversity in coastal and oceanic biomes in megadiverse Mexico

2023· article· en· W4386422263 on OpenAlex

Why this work is in the frame

A frame that forgets how it found something cannot be audited. These are the routes that admitted this work.

affAt least one author lists a Canadian institution in the pinned OpenAlex snapshot.

Bibliographic record

VenueBotanica Marina · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicPlant Pathogens and Fungal Diseases
Canadian institutionsAcadia University
FundersDivision of Ocean SciencesDirección General de Asuntos del Personal Académico, Universidad Nacional Autónoma de MéxicoDirectorate for Biological SciencesUniversidad Nacional Autónoma de México
KeywordsBiomeEcologyHydrothermal ventDeep seaGeographyTaxonOceanographyBiologyGeologyEcosystemPaleontology

Abstract

fetched live from OpenAlex

Abstract A comprehensive literature review of mycodiversity in sandy beaches and oceanic environments in Mexico is presented through the analysis of published works from 1949 to early 2023. In addition, four unexplored sandy beaches in the Pacific Ocean and Gulf of California were sampled in order to fill knowledge gaps in terms of sampling biases. Marine fungi of Mexico were reported from water column, sediment, and debris samples collected in sandy beaches, open ocean, deep-sea plains, hydrothermal vents, and oxygen minimum zones in the Gulf of Mexico, the Pacific Ocean, the Gulf of California, and the Caribbean Sea. The taxonomic, functional, and genetic diversity, as well as distribution patterns and potential use of marine fungal genetic resources are discussed. A list of 126 species in 83 genera, 40 families, 25 orders, 12 classes, three phyla and one subphylum (excluding non-cultured taxa) of marine fungi is documented from Mexico. Lastly, we identified areas that would benefit from additional research, including the exploration of further deep-sea biomes in the Pacific Ocean, and coastal areas covering ecoregions in the states of Sonora, Sinaloa, Nayarit, Michoacán, and Oaxaca.

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

Full frame distilled prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. Learned from the 10,348 direct Codex labels and 10,348 direct Gemma labels. Candidate is the union of thresholded teacher heads; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels or direct frontier model labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: codex-gemma-dda1882f352aValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Observational · Consensus signal: Observational
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.267
Threshold uncertainty score0.406

Codex and Gemma teacher scores by category

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.000
Insufficient payload (model declined to judge)0.0000.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.043
GPT teacher head0.254
Teacher spread0.211 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it