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Circadian Regulation Of The Plasminogen Activator System In The Development Of Skeletal Muscle Fibrosis

2023· article· en· W4387062969 on OpenAlexaff
Jacob M. Ouellette, Zainab Taleb, Vania Carmona Alcocer, Phillip Karpowicz, Matthew P. Krause

Bibliographic record

VenueMedicine & Science in Sports & Exercise · 2023
Typearticle
Languageen
FieldBiochemistry, Genetics and Molecular Biology
TopicGenetics and Physical Performance
Canadian institutionsUniversity of Windsor
Fundersnot available
KeywordsSkeletal muscleCircadian rhythmEndocrinologyPlasminogen activatorInternal medicineCircadian clockBiologyTissue plasminogen activatorFibrosisCell biologyMedicine

Abstract

fetched live from OpenAlex

PURPOSE: Skeletal muscle accounts for approximately 40% of a person’s weight and is fundamental for movement. Reductions in movement are associated with decreased quality of life and increased mortality. Therefore, adequate regeneration of skeletal muscle following injury is crucial. Remodeling, including some degradation, of the extracellular matrix (ECM) by the plasminogen activator (PA) system is essential for regeneration. This is performed by the activity of plasmin, which is converted from plasminogen via uPA and tPA. To prevent excessive ECM degradation, the PA system is regulated by plasminogen activator inhibitor-1 (PAI-1); however, skeletal muscle fibrosis can result from excessive PAI-1 activity. Another interconnected system involved in skeletal muscle regeneration is circadian rhythms. Circadian rhythms are 24-hour cycles which involve the proteins Bmal1 and Clock, and the families of Period and Cryptochrome. Notably, mice with muscle-specific loss of Bmal1 demonstrate skeletal muscle fibrosis; however, the mechanisms of this are not well characterized. Therefore, the goal of this study is to investigate the role of circadian rhythms in PA system-mediated development of skeletal muscle fibrosis. METHODS: A pilot study utilizing 18 global Bmal1-/- mice and 18 wild-type mice will be conducted to determine if disruption to the circadian rhythm alters PA system activity. Mice will be sacrificed at ZT0, ZT4, ZT8, ZT12, ZT16 and ZT20 (n = 3/group), allowing for characterization of the entire circadian cycle. Skeletal muscle samples will be homogenized and prepared for western blotting to assess Bmal1 and PAI-1 protein levels. PCR analysis of the circadian genes Bmal1, Clock, Per1, Per2, Cry1, Cry2, and Rev-erbα, and the PA system genes PAI-1, uPA, and plasminogen will be done. RESULTS: Preliminary analysis of PAI-1 levels indicate that there is expression of PAI-1 in skeletal muscle as compared to control tissue (11.22 ± 2.30 vs. 5.09 ± 2.39; data are in arbitrary units; mean ± standard deviation). CONCLUSION: This work will develop our understanding of the role of the PA system in the development of skeletal muscle fibrosis and determine if further examination of the interconnection between the PA system, skeletal muscle fibrosis, and circadian rhythms is warranted. Supported by: NSERC#2016-05073

Fetched live from OpenAlex and de-inverted. Abstracts are not stored in this database: the inverted indexes are 8.6 GB of the frame’s 9.3 GB of text, and the host has 13 GB free.

How this classification was reachedexpand

Full frame machine prediction

Teacher imitation

Not calibrated prevalence, not ground truth. Human validation pending. The Gemma side is a direct model label for every work in the frame, read from the title-only record. The Codex side is a classifier learned from the 10,348 direct Codex labels and calibrated to design-weighted sample rates; fields without enough sample support carry no Codex call. Candidate is the union of the two sides; consensus is their intersection. These outputs are machine_predicted_unvalidated and are not human labels.

metaresearch head score (Codex)0.000
metaresearch head score (Gemma)0.000
Version: metacan-v3-hybrid-931329e0061cValidation status: machine_predicted_unvalidated
Candidate categoriesnone
Consensus categoriesnone
DomainCandidate signal: none · Consensus signal: none
Study designCandidate signal: Bench or experimental · Consensus signal: Bench or experimental
GenreCandidate signal: Empirical · Consensus signal: Empirical
Teacher disagreement score0.001
Threshold uncertainty score0.004

Distilled classifier scores by category (both heads)

CategoryCodexGemma
Metaresearch0.0000.000
Meta-epidemiology (narrow)0.0000.000
Meta-epidemiology (broad)0.0000.000
Bibliometrics0.0000.000
Science and technology studies0.0000.000
Scholarly communication0.0000.000
Open science0.0000.000
Research integrity0.0000.001
Insufficient payload (model declined to judge)0.0010.000

Machine scores (provisional)

The two teacher heads of the student model, read on this work. A score orders the frame for review; it never asserts a category, and the validation status ships verbatim with every row.

Baseline scores from an immature model (maturity gate not passed, 7 training rounds). Scores rank; they never assert a category.

Opus teacher head0.011
GPT teacher head0.243
Teacher spread0.232 · how far apart the two teachers sit on this one work
Validation statusscore_only:v0-immature-baseline · verbatim from the scoring run: score_only means the number may rank works, and no category label ships from it

Classification

machine, unvalidated

Machine predicted; a candidate call from one source (direct Gemma or distilled Codex), not a consensus.

The models applied no category: nothing in the taxonomy fit this work.
Study designBench or experimental
Domainnot available
GenreEmpirical

How this classification was reached, model by model and score by score, is at the end of the page under "How this classification was reached".

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Citations0
Published2023
Admission routes1
Has abstractyes

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